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Report for CCDS10597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10597.1 Public Homo sapiens 16 CRYM 24 110 108 CCDS HistoryNCBI Gene:1428Re-query CCDS DB by CCDS ID:10597.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219599.8 ENSP00000219599.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000219599.8Link to Ensembl Protein Viewer:ENSP00000219599.3Re-query CCDS DB by Nucleotide ID:ENST00000219599Re-query CCDS DB by Protein ID:ENSP00000219599
Original member Current member EBI ENST00000543948.5 ENSP00000440227.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543948.5Link to Ensembl Protein Viewer:ENSP00000440227.1Re-query CCDS DB by Nucleotide ID:ENST00000543948Re-query CCDS DB by Protein ID:ENSP00000440227
Original member Current member EBI ENST00000572914.2 ENSP00000461904.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000572914.2Link to Ensembl Protein Viewer:ENSP00000461904.2Re-query CCDS DB by Nucleotide ID:ENST00000572914Re-query CCDS DB by Protein ID:ENSP00000461904
Original member Current member NCBI NM_001376256.1 NP_001363185.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001376256.1Link to Protein Sequence:NP_001363185.1Re-query CCDS DB by Nucleotide ID:NM_001376256Re-query CCDS DB by Protein ID:NP_001363185Link to BLAST:NP_001363185.1
Original member Current member NCBI NM_001888.5 NP_001879.1 Accepted alive Link to Nucleotide Sequence:NM_001888.5Link to Protein Sequence:NP_001879.1Re-query CCDS DB by Nucleotide ID:NM_001888Re-query CCDS DB by Protein ID:NP_001879Link to BLAST:NP_001879.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363185.1 314 Q14894 314 100% 0 0
NP_001879.1 314 Q14894 314 100% 0 0

Chromosomal Locations for CCDS 10597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 21258781 21258845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21261254 21261338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21262037 21262158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21267554 21267737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21269790 21269891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21275532 21275594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21277431 21277584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 21278082 21278251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGAGCCGGGTACCAGCGTTCCTGAGCGCGGCCGAGGTGGAGGAACACCTCCGCAGCTCCAGCCTCCTCA
TCCCGCCTCTAGAGACGGCCCTGGCCAACTTCTCCAGCGGTCCCGAAGGAGGGGTCATGCAGCCCGTGCG
CACCGTGGTGCCGGTGACCAAGCACAGGGGCTACCTGGGGGTCATGCCCGCCTACAGTGCTGCAGAGGAT
GCACTGACCACCAAGTTGGTCACCTTCTACGAGGACCGCGGCATCACCTCGGTCGTCCCTTCCCACCAGG
CTACTGTGCTACTCTTTGAGCCCAGCAATGGCACCCTGCTGGCGGTCATGGATGGAAATGTCATAACTGC
AAAGAGAACAGCTGCAGTTTCTGCCATTGCCACCAAGTTTCTGAAACCTCCCAGCAGTGAAGTGCTGTGC
ATCCTTGGGGCTGGGGTCCAGGCCTACAGCCATTATGAGATCTTCACAGAGCAGTTCTCCTTTAAGGAGG
TGAGGATATGGAACCGCACCAAAGAAAATGCAGAGAAGTTTGCAGACACAGTGCAAGGAGAGGTACGGGT
CTGTTCTTCGGTCCAGGAGGCTGTGGCAGGTGCAGATGTGATCATCACAGTCACCCTGGCAACAGAGCCC
ATTTTGTTTGGTGAATGGGTGAAGCCAGGGGCTCACATCAATGCTGTTGGAGCCAGCAGACCTGACTGGA
GAGAACTGGATGATGAGCTCATGAAAGAAGCTGTGCTGTACGTGGATTCCCAGGAGGCTGCCCTGAAGGA
GTCTGGAGATGTCCTGCTGTCAGGGGCCGAGATCTTTGCTGAGCTGGGAGAAGTGATTAAGGGAGTGAAA
CCAGCCCACTGTGAGAAGACCACCGTGTTCAAGTCTTTGGGAATGGCAGTGGAAGACACAGTTGCAGCCA
AACTCATCTATGATTCCTGGTCATCTGGTAAATAA

Translation (314 aa):
MSRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMPAYSAAED
ALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLC
ILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEP
ILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVK
PAHCEKTTVFKSLGMAVEDTVAAKLIYDSWSSGK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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