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Report for CCDS30394.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30394.1 Public Mus musculus X Drp2 23 108 98 CCDS HistoryNCBI Gene:13497Re-query CCDS DB by CCDS ID:30394.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30394.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113226.1 ENSMUSP00000108852.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113226.1Link to Ensembl Protein Viewer:ENSMUSP00000108852.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113226Re-query CCDS DB by Protein ID:ENSMUSP00000108852
Original member Current member EBI ENSMUST00000113228.7 ENSMUSP00000108854.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113228.7Link to Ensembl Protein Viewer:ENSMUSP00000108854.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113228Re-query CCDS DB by Protein ID:ENSMUSP00000108854
Original member Current member EBI ENSMUST00000153424.7 ENSMUSP00000115246.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000153424.7Link to Ensembl Protein Viewer:ENSMUSP00000115246.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000153424Re-query CCDS DB by Protein ID:ENSMUSP00000115246
Original member NCBI NM_010078.3 NP_034208.2 Updated not alive Link to Nucleotide Sequence:NM_010078.3Link to Protein Sequence:NP_034208.2Re-query CCDS DB by Nucleotide ID:NM_010078Re-query CCDS DB by Protein ID:NP_034208
Current member NCBI NM_010078.4 NP_034208.2 Accepted alive Link to Nucleotide Sequence:NM_010078.4Link to Protein Sequence:NP_034208.2Re-query CCDS DB by Nucleotide ID:NM_010078Re-query CCDS DB by Protein ID:NP_034208Link to BLAST:NP_034208.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034208.2 957 Q05AA6 957 100% 0 0

Chromosomal Locations for CCDS 30394.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 134423837 134423953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134428314 134428477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134430475 134430631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134431531 134431651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134433791 134434059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134434425 134434571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134435023 134435101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134437021 134437081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134437410 134437471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134438819 134438893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134439920 134440121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134440335 134440420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134441229 134441386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134441662 134441828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134443652 134443763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134446215 134446351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134446628 134446693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134446962 134447027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134447848 134447991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134449652 134449889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134452168 134452288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134452576 134452700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2874 nt):
ATGCAACCTTTGGTCATGCAGGGATGCCCTTACACCCTCCCACGATGTCATGAGTGGCATGCTGCTGACC
GGTTTCATCACAGCAGCAGCCTCCGAAACACCTGTCCCCAGCCTCAGGTTAGAGCTGCGGTCACCATCCC
TGCTCCACCTTGGGATGGTGCCGGGGATCCCTGCCTAAGTCCAAAGCTCTTGAACGGGACTGTTGGAGCC
ACCGGGCCCCTGGAGCCATCAGCCATGAATCTGTGTTGGAATGAAATAAAAAAGAAGTCTCACAACCTCC
GCGCTCGCCTAGAGGCCTTCTCAGACCTCAGTGGAAAACTTCAGCTCCCGCTCCGAGAGATTATTGACTG
GCTCAGCCAAAAGGATGAGGAGTTGTCAGCTCAGCTCCCCTTGCAAGGGGATGTGGCCCTGGTACAACAG
GAGAAGGAGACACATGCAGCCTTCATGGAAGAAGTCAAGTCTAAGGGCCCCTACATCTCCTCTGTGCTTG
AATCCGCCCAGGCTTTTCTGTCCCAGCATCCATTTGAAGAATTAGAGGAGTCTCAATCTGAGAGTAAAGA
TACCTCCCCCAGACAGCGGATTCAAAACCTTAGTCGCTTTGTATGGAAGCAGGCAACAGTGGCCAGTGAG
CTGTGGGAGAAGCTGACAGCCCGCTGTGTAGATCAGCATCGCCACATTGAGCATACTCTGGAACATCTAT
TGGAGATCCAAGGGGCAATGGAGGAATTGAGCAGTACTTTGACCCAAGCAGAGGGAGTCCGAGCCACGTG
GGAGCCCATAGGAGATCTCTTTATTGATTCCCTCCCAGAGCATATCCAAGCCATCAAGCTATTCAAAGAA
GAATTCTCTCCTGTGAAAGATGGGGTGAAGTTAGTGAATGATCTGGCCCACCAGCTTGCCATCTCTGATG
TGCACTTGTCAATGGAGAATTCCAGGGCTCTGGAACAGATCAACATCCGGTGGAAACAGCTCCAGGTGTC
AGTGGCTGAGAGGCTTAAGCAACTCCAGGATGCCCACCGGGACTTTGGGCCTGGGTCACAGCACTTCCTC
TCCACTTCTGTCCAAGTTCCCTGGGAAAGAGCAATTTCTCCCAATAAAGTCCCCTACTACATCAACCACC
AGGCTCAGACCACATGCTGGGACCATCCTAAGATGACTGAGTTATACCAAACCCTAGCCGATCTGAACAA
CATTAAGTTCTCAGCTTACCGCACTGCCATGAAGCTCCGCAGAGTCCAGAAGGCCCTGCGCCTGGATCTG
GTAACTTTAACTACAGCTCTGGAGATCTTCAATGAGCATGACTTGCAGGCCAGTGAACATGTGATGGATG
TGGTGGAGGTCATTCACTGCTTGACTGCCTTGTATGAACGACTGGAGGAGGAAAGAGGCATCCTGGTCAA
TGTGCCACTGTGTGTAGACATGAGCCTCAACTGGCTCCTCAATGTTTTTGATAGTGGTCGCAGTGGAAAG
ATGCGAGCATTGTCCTTTAAGACTGGCATCGCATGCCTGTGTGGCACGGAAGTGAAAGAAAAACTTCAGT
ATCTCTTCAGCCAAGTAGCCAATTCAGGCAGCCAGTGTGATCAACGCCATCTCGGTGCCCTGCTTCATGA
AGCCATTCAAGTGCCCCGTCAGCTGGGTGAAGTGGCAGCATTTGGGGGCAGCAATGTGGAGCCCAGTGTC
CGTAGCTGCTTTCGCTTTAGCACTGGCAAGCCAGTCATTGAAGCTTCCCAATTCCTGGAGTGGGTCAACT
TGGAGCCCCAGTCTATGGTGTGGCTGGCTGTTCTGCATCGGGTCACCATCGCTGAGCAAGTGAAGCATCA
AACCAAGTGCTCTATCTGTAGACAGTGCCCCATCAAAGGGTTCAGGTACCGGAGTCTGAAACAGTTTAAC
GTGGATATCTGCCAGACCTGCTTCTTGACCGGCAGGGCCAGCAAAGGCAACAAGCTCCACTATCCCATCA
TGGAGTATTACACACCGACCACATCTAGTGAAAACATGAGGGACTTTGCCACAACCTTAAAGAATAAATT
CCGCTCCAAGCAGTATTTCAGCAAACACCCTCAGCGAGGTTATCTGCCCGTGCAGTCAGTTCTGGAGAGC
GACTGCAGTGAGACACCTGCTTCTTCCCCGATGTTGCCACACGCTGACACACACTCTCGAATTGAACATT
TTGCCAGCAGGCTTGCTGAGATGGAAAGTCAAAATTGTTCCTTTTTTAATGACAGCCTGTCCCCGGATGA
TAGCATCGATGAGGACCAGTACCTGTTGCGGCACTCCAGCCCCATCACAGACCGAGAGCCGGCCTTTGGA
CAGCAGGCTCCATGCAGCATGGCCACAGAAAGCAAGGGGGAGCTAGAGAAGATCTTGGCCCATTTAGAAG
ATGAGAACCGGATTCTCCAGGGAGAGCTGAGGCGCCTGAAATGGCAGCACGAGGAGGCAGCCGAGGCACC
TACCCTGGTTGAGGGCTCTGCTGAAGCCACCCCAGACCACCGCAATGAAGAACTTCTGGCTGAAGCCAGG
ATCCTGCGGCAGCACAAAAGCCGCCTGGAGACGCGCATGCAGATCCTTGAAGACCACAACAAGCAGCTCG
AGTCTCAGCTGCAACGCCTGAGGGAGCTGCTCCTGCAGCCACCCAGTGAATCAGATGGCAATGGCTCTGC
AGGCTCCTCCCTAGCTTCCTCTCCACGCCAGTCAGAAGGCAGTCATCCCCGGGAGAAGGGACAGACTACT
CCAGACACTGAGGTTGCAGATGATGTGGGGTCAAAGAGTCAGGATGTCAGCCTATGCTTAGAAGACATCA
TGGAGAAGCTCCGCCATGCCTTCCCCAGTGTGCGAAGCTCTGATGTGACTGCAAACACTCTGCTGGCCTC
TTGA

Translation (957 aa):
MQPLVMQGCPYTLPRCHEWHAADRFHHSSSLRNTCPQPQVRAAVTIPAPPWDGAGDPCLSPKLLNGTVGA
TGPLEPSAMNLCWNEIKKKSHNLRARLEAFSDLSGKLQLPLREIIDWLSQKDEELSAQLPLQGDVALVQQ
EKETHAAFMEEVKSKGPYISSVLESAQAFLSQHPFEELEESQSESKDTSPRQRIQNLSRFVWKQATVASE
LWEKLTARCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWEPIGDLFIDSLPEHIQAIKLFKE
EFSPVKDGVKLVNDLAHQLAISDVHLSMENSRALEQINIRWKQLQVSVAERLKQLQDAHRDFGPGSQHFL
STSVQVPWERAISPNKVPYYINHQAQTTCWDHPKMTELYQTLADLNNIKFSAYRTAMKLRRVQKALRLDL
VTLTTALEIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVPLCVDMSLNWLLNVFDSGRSGK
MRALSFKTGIACLCGTEVKEKLQYLFSQVANSGSQCDQRHLGALLHEAIQVPRQLGEVAAFGGSNVEPSV
RSCFRFSTGKPVIEASQFLEWVNLEPQSMVWLAVLHRVTIAEQVKHQTKCSICRQCPIKGFRYRSLKQFN
VDICQTCFLTGRASKGNKLHYPIMEYYTPTTSSENMRDFATTLKNKFRSKQYFSKHPQRGYLPVQSVLES
DCSETPASSPMLPHADTHSRIEHFASRLAEMESQNCSFFNDSLSPDDSIDEDQYLLRHSSPITDREPAFG
QQAPCSMATESKGELEKILAHLEDENRILQGELRRLKWQHEEAAEAPTLVEGSAEATPDHRNEELLAEAR
ILRQHKSRLETRMQILEDHNKQLESQLQRLRELLLQPPSESDGNGSAGSSLASSPRQSEGSHPREKGQTT
PDTEVADDVGSKSQDVSLCLEDIMEKLRHAFPSVRSSDVTANTLLAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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