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Report for CCDS15014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15014.1 Public Mus musculus 1 Cryga 23 108 98 CCDS HistoryNCBI Gene:12964Re-query CCDS DB by CCDS ID:15014.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15014.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061497.8 ENSMUSP00000058548.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061497.8Link to Ensembl Protein Viewer:ENSMUSP00000058548.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000061497Re-query CCDS DB by Protein ID:ENSMUSP00000058548
Original member NCBI NM_007774.3 NP_031800.1 Updated not alive Link to Nucleotide Sequence:NM_007774.3Link to Protein Sequence:NP_031800.1Re-query CCDS DB by Nucleotide ID:NM_007774Re-query CCDS DB by Protein ID:NP_031800
Current member NCBI NM_007774.4 NP_031800.1 Accepted alive Link to Nucleotide Sequence:NM_007774.4Link to Protein Sequence:NP_031800.1Re-query CCDS DB by Nucleotide ID:NM_007774Re-query CCDS DB by Protein ID:NP_031800Link to BLAST:NP_031800.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031800.1 174 P04345 174 100% 0 0

Chromosomal Locations for CCDS 15014.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65100453 65100725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65102981 65103223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65103329 65103337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGGAAAGATCACCTTCTACGAGGACCGCGGCTTCCAGGGCCGCTGCTATGAGTGCAGCAGCGACTGCC
CCAACCTGCAGACCTACTTCAGCCGCTGCAACTCCATCCGTGTGGACAGTGGCTGCTGGATGCTCTATGA
GCGCCCCAACTACCAGGGCTACCAGTACTTCCTGCGTCGCGGGGACTACCCTGACTACCAGCAGTGGATG
GGTTTCAGCGACTCCATCCGCTCCTGCCGTTCCATTCCATACACCAGCTCTCACAGGATAAGGCTTTATG
AGAGAGATGACTACCGGGGCCTTGTGTCTGAGCTCATGGACGACTGTTCCTGCATCCACGATCGCTTCCG
CCTCCATGAGATCTACTCCATGCACGTGCTGGAGGGCTGCTGGGTCCTCTATGAGATGCCCAACTACCGA
GGCCGCCAATACCTGCTCAGGCCTGGAGACTACAGGCGCTACCACGACTGGGGCGCCATGGATGCCAAGG
TCGGCTCTCTGAGACGGGTCATGGATTTGTACTAA

Translation (174 aa):
MGKITFYEDRGFQGRCYECSSDCPNLQTYFSRCNSIRVDSGCWMLYERPNYQGYQYFLRRGDYPDYQQWM
GFSDSIRSCRSIPYTSSHRIRLYERDDYRGLVSELMDDCSCIHDRFRLHEIYSMHVLEGCWVLYEMPNYR
GRQYLLRPGDYRRYHDWGAMDAKVGSLRRVMDLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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