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Report for CCDS19993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19993.1 Public Mus musculus 6 Akr1b7 23 108 98 CCDS HistoryNCBI Gene:11997Re-query CCDS DB by CCDS ID:19993.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19993.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000007449.8 ENSMUSP00000007449.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000007449.8Link to Ensembl Protein Viewer:ENSMUSP00000007449.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000007449Re-query CCDS DB by Protein ID:ENSMUSP00000007449
Original member Current member NCBI NM_009731.2 NP_033861.2 Accepted alive Link to Nucleotide Sequence:NM_009731.2Link to Protein Sequence:NP_033861.2Re-query CCDS DB by Nucleotide ID:NM_009731Re-query CCDS DB by Protein ID:NP_033861Link to BLAST:NP_033861.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033861.2 316 P21300 316 100% 0 0

Chromosomal Locations for CCDS 19993.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 34412410 34412475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34415320 34415487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34416118 34416234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34417283 34417360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34418994 34419116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34419408 34419514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34419919 34420000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34420446 34420529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34421063 34421145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34422846 34422888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCCACCTTCGTGGAACTCAGTACCAAAGCCAAGATGCCCCTTGTGGGCCTGGGCACCTGGAAGTCTT
CCCCAGGCCAAGTCAAGGAAGCCGTGAAGGCGGCCATTGATGCTGGGTATCGCCACATTGACTGTGCCTA
TGTGTATCACAATGAGAATGAGGTGGGAGAAGCTATCCAAGAGAAGATCAAAGAGAATGCTGTGAAGCGG
GAGGATCTCTTCATCGTCAGCAAGCTGTGGGCCACATTCTTTGAGAAAAGCCTGGTGAAGAAAGCCTTCC
AGAACACCCTCTCGGATCTGAAGCTGGACTATCTGGACCTGTATCTGGTCCACTGGCCACAGGGATTTCA
GGCTGGGAATGCGTTATTACCCAAAGACAATAAAGGCAAAGTTCTCCTGAGTAAATCCACATTCTTGGAT
GCCTGGGAGGCCATGGAGGAACTGGTGGACCAGGGGCTGGTGAAAGCTCTGGGCATCTCCAACTTCAACC
ACTTCCAGATTGAAAGGCTCCTGAACAAGCCTGGACTAAAACATAAGCCAGTGACCAACCAGATTGAGAG
CCACCCTTATCTCACCCAGGAAAAACTGATCCAATACTGTCAATCCAAGGGCATCGCTGTTACAGCCTAC
AGTCCCCTGGGCTCCCCAGACAGGCCTTATGCCAAGCCAGAAGACCCCGTAGTAATGGAGATTCCCAAGA
TCAAAGAGATTGCTGCAAAACACAAGAAAACAGTAGCTCAGGTTCTGATTCGGTTCCATGTCCAAAGGAA
TGTGGTGGTGATCCCCAAGTCTGTGACACCCTCACGCATACAGGAGAACCTGCAGGTCTTCGACTTCCAG
TTGAGTGAGGAGGACATGGCTGCCATTCTCAGCTTCAACAGGAACTGGAGGGCCTGTGACCTGTTGGATG
CAAGGACTGAAGAGGACTATCCTTTCCACGAGGAATACTGA

Translation (316 aa):
MATFVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKR
EDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQGFQAGNALLPKDNKGKVLLSKSTFLD
AWEAMEELVDQGLVKALGISNFNHFQIERLLNKPGLKHKPVTNQIESHPYLTQEKLIQYCQSKGIAVTAY
SPLGSPDRPYAKPEDPVVMEIPKIKEIAAKHKKTVAQVLIRFHVQRNVVVIPKSVTPSRIQENLQVFDFQ
LSEEDMAAILSFNRNWRACDLLDARTEEDYPFHEEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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