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Report for CCDS27040.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27040.1 Public Mus musculus 14 Ang2 23 108 98 CCDS HistoryNCBI Gene:11731Re-query CCDS DB by CCDS ID:27040.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27040.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051274.1 ENSMUSP00000062902.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051274.1Link to Ensembl Protein Viewer:ENSMUSP00000062902.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000051274Re-query CCDS DB by Protein ID:ENSMUSP00000062902
Original member Current member EBI ENSMUST00000228835.1 ENSMUSP00000154100.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000228835.1Link to Ensembl Protein Viewer:ENSMUSP00000154100.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000228835Re-query CCDS DB by Protein ID:ENSMUSP00000154100
Original member NCBI NM_007449.2 NP_031475.2 Updated not alive Link to Nucleotide Sequence:NM_007449.2Link to Protein Sequence:NP_031475.2Re-query CCDS DB by Nucleotide ID:NM_007449Re-query CCDS DB by Protein ID:NP_031475
Current member NCBI NM_007449.3 NP_031475.2 Accepted alive Link to Nucleotide Sequence:NM_007449.3Link to Protein Sequence:NP_031475.2Re-query CCDS DB by Nucleotide ID:NM_007449Re-query CCDS DB by Protein ID:NP_031475Link to BLAST:NP_031475.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031475.2 145 Q64438 145 100% 0 0

Chromosomal Locations for CCDS 27040.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51195486 51195923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGCGATGAGCCCAGGTCCTTTGTTCTTGGTCTTCCTGTTGGGTCTGGTTGTGATCCCTCCCACTCTGT
CTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGCACTATGATGCCAAGCCAAAAGGCCGGGACGA
CAGATACTGCGAAAGTATGATGGTGAAAAGAAAGCTAACCTCTTTCTGCAAAGATGTCAACACCTTTATC
CATGACACCAAGAACAACATCAAGGCCATCTGTGGAAAGAAAGGAAGCCCTTATGGACGAAATTTAAGAA
TAAGCAAGTCTCACTTCCAGGTCACCACTTGCACACACAAAGGAAGGTCTCCCCGGCCTCCATGCAGGTA
CCGAGCCTCTAAAGGGTTCAGATATATTATTATTGGCTGTGAGAATGGCTGGCCTGTCCACTTTGATGAG
TCTTTTATCAGTCCATAG

Translation (145 aa):
MAMSPGPLFLVFLLGLVVIPPTLSQDDSRYTKFLTQHYDAKPKGRDDRYCESMMVKRKLTSFCKDVNTFI
HDTKNNIKAICGKKGSPYGRNLRISKSHFQVTTCTHKGRSPRPPCRYRASKGFRYIIIGCENGWPVHFDE
SFISP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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