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Report for CCDS35686.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35686.1 Public Mus musculus 1 Serpinb7 23 108 98 CCDS HistoryNCBI Gene:116872Re-query CCDS DB by CCDS ID:35686.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35686.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086690.5 ENSMUSP00000083896.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086690.5Link to Ensembl Protein Viewer:ENSMUSP00000083896.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000086690Re-query CCDS DB by Protein ID:ENSMUSP00000083896
Original member NCBI NM_027548.3 NP_081824.1 Updated not alive Link to Nucleotide Sequence:NM_027548.3Link to Protein Sequence:NP_081824.1Re-query CCDS DB by Nucleotide ID:NM_027548Re-query CCDS DB by Protein ID:NP_081824
Current member NCBI NM_027548.4 NP_081824.1 Accepted alive Link to Nucleotide Sequence:NM_027548.4Link to Protein Sequence:NP_081824.1Re-query CCDS DB by Nucleotide ID:NM_027548Re-query CCDS DB by Protein ID:NP_081824Link to BLAST:NP_081824.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081824.1 380 Q9D695 380 100% 0 0

Chromosomal Locations for CCDS 35686.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 107428249 107428416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107434736 107434786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107435327 107435443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107445992 107446109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107448108 107448250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107450176 107450322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107451609 107452007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAG
GAAATGGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGACCCTAATCCGTCTGGGTGCTCG
AGGTGACTGTGCACGTCAGATTGACAAGGCACTGCACTTTAACATACCATCAAGACAAGGAAACTCATCT
AATAATCAGCCAGGACTTCAGTATCAATTGAAAAGAGTTCTTGCTGACATAAACTCATCTCATAAGGATT
ATGAACTCAGCATTGCCACTGGAGTTTTTGCAGAAAAAGTCTATGACTTTCATAAGAACTACATTGAGTG
TGCTGAAAACTTATACAATGCTAAAGTGGAAAGAGTTGACTTCACAAATGATGTACAAGATACCAGATTT
AAAATTAATAAATGGATTGAAAATGAGACACATGGAAAGATCAAGAAGGTGTTGGGCGACAGCAGCCTCA
GCTCGTCGGCTGTCATGGTGCTGGTGAACGCTGTTTACTTCAAAGGCAAATGGAAATCGGCCTTCACCAA
GACTGATACCCTCAGTTGCCGTTTTAGGTCTCCCACGTGTCCTGGAAAAGTAGTTAATATGATGCATCAA
GAACGGCGGTTCAATTTGTCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTG
GCATAAGCATGTACATTATGCTGCCTGAGGATGGCCTATGTGAAATTGAAAGCAAGCTGAGTTTCCAGAA
TCTGATGGACTGGACCAATAGGAGGAAAATGAAATCTCAGTATGTGAACGTGTTTCTCCCCCAGTTCAAG
ATAGAGAAGAATTATGAAATGACGCACCACTTGAAATCCTTAGGCTTGAAAGATATCTTTGATGAGTCCA
GTGCAGATCTCTCTGGAATTGCCTCTGGAGGTCGTCTCTACGTATCAAAGCTAATGCACAAGTCATTCAT
AGAGGTCTCAGAGGAGGGCACTGAAGCCACTGCTGCCACAGAAAATAACATTGTTGAAAAGCAGCTTCCT
GAGTCCACAGTGTTCAGAGCCGACCGCCCCTTTCTGTTTGTCATCAAGAAGAATGACATCATCTTATTTA
CTGGCAAAGTCTCTTGTCCTTGA

Translation (380 aa):
MASLAAANAEFGFDLFREMDSSQGNGNVFFSSLSIFTALTLIRLGARGDCARQIDKALHFNIPSRQGNSS
NNQPGLQYQLKRVLADINSSHKDYELSIATGVFAEKVYDFHKNYIECAENLYNAKVERVDFTNDVQDTRF
KINKWIENETHGKIKKVLGDSSLSSSAVMVLVNAVYFKGKWKSAFTKTDTLSCRFRSPTCPGKVVNMMHQ
ERRFNLSTIQQPPMQVLELQYHGGISMYIMLPEDGLCEIESKLSFQNLMDWTNRRKMKSQYVNVFLPQFK
IEKNYEMTHHLKSLGLKDIFDESSADLSGIASGGRLYVSKLMHKSFIEVSEEGTEATAATENNIVEKQLP
ESTVFRADRPFLFVIKKNDIILFTGKVSCP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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