NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS15127.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15127.1 Public Mus musculus 1 Akp3 23 108 98 CCDS HistoryNCBI Gene:11648Re-query CCDS DB by CCDS ID:15127.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15127.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044878.3 ENSMUSP00000037497.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044878.3Link to Ensembl Protein Viewer:ENSMUSP00000037497.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000044878Re-query CCDS DB by Protein ID:ENSMUSP00000037497
Original member Current member NCBI NM_007432.3 NP_031458.2 Accepted alive Link to Nucleotide Sequence:NM_007432.3Link to Protein Sequence:NP_031458.2Re-query CCDS DB by Nucleotide ID:NM_007432Re-query CCDS DB by Protein ID:NP_031458Link to BLAST:NP_031458.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031458.2 559 P24822 559 98.9267% 0 6

Chromosomal Locations for CCDS 15127.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 87125008 87125074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87125158 87125274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87125392 87125507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87125627 87125801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87125880 87126052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87126310 87126444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87126526 87126598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87126728 87126862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87126936 87127127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87127330 87127443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87127530 87127912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGCAGGGCACCTGGGTGCTGCTGCTGCTGGGCCTCAGGCTACAGCTGTCCCTTAGTGTCATTCCAGTGG
AGGAGGAGAACCCGGCCTTCTGGAACAAGAAGGCAGCCGAGGCCCTGGATGCTGCCAAGAAGCTGCAGCC
CATTCAGACATCAGCTAAGAACCTCATCATCTTCCTGGGTGACGGGATGGGGGTACCAACAGTGACAGCC
ACCAGGATCCTAAAGGGACAGTTGGAAGGTCATCTAGGACCTGAGACACCCCTAGCCATGGACCGCTTCC
CATATATGGCTCTGTCCAAGACATACAGTGTGGACAGACAGGTTCCAGACAGTGCAAGCACGGCCACCGC
CTACCTGTGTGGGGTCAAGACCAACTACAAGACCATCGGCGTGAGCGCAGCCGCGAGATTCGACCAGTGC
AACACCACATTTGGCAATGAGGTCTTCTCAGTGATGTACCGTGCCAAGAAAGCAGGAAAATCCGTAGGTG
TGGTGACCACCACCAGAGTGCAGCACGCCTCTCCCTCGGGCACATATGTTCACACAGTGAACCGCAATTG
GTATGGGGATGCTGACATGCCTGCCTCTGCGCTGCGGGAAGGTTGCAAGGACATTGCTACACAACTCATC
TCCAACATGGACATTAATGTGATCCTTGGTGGGGGCCGAAAATACATGTTTCCTGCTGGAACCCCAGACC
CCGAGTATCCAAATGATGCTAATGAGACTGGAACCAGATTGGATGGCAGGAATCTGGTGCAGGAATGGCT
GTCAAAGCACCAGGGATCCCAGTATGTTTGGAATCGTGAACAACTCATTCAGAAGGCCCAGGATCCGTCA
GTGACATACCTCATGGGCCTCTTTGAGCCTGTAGACACAAAATTTGATATTCAACGAGATCCCCTGATGG
ACCCATCTCTGAAGGATATGACAGAGGCGGCCGTGAAAGTGCTAAGCAGGAACCCCAAAGGCTTTTATCT
CTTTGTGGAGGGGGGCCGAATCGACCGTGGTCACCATCTGGGCACAGCTTATCTGGCGCTGACTGAGGCT
GTGATGTTCGACTTAGCCATCGAGAGGGCCAGCCAGCTCACTAGTGAACGCGACACTCTGACCATAGTCA
CTGCTGACCACTCCCATGTCTTCTCCTTTGGTGGCTACACACTTCGAGGGACCTCCATCTTCGGGCTGGC
TCCCCTCAATGCTCTGGACGGCAAGCCCTACACCTCCATCCTGTATGGCAACGGCCCAGGCTATGTCGGT
ACAGGGGAAAGACCCAACGTCACCGCCGCTGAAAGCAGTGGCTCATCGTACCGGCAGCAGGCTGCTGTGC
CGGTGAAGTCGGAGACCCACGGCGGGGAGGACGTGGCGATATTCGCGCGTGGCCCGCAGGCGCACTTGCT
GCACGGGGTGCAGGAGCAGAACTACATCGCGCACGTCATGGCCTTCGCAGGCTGCCTGGAGCCCTACACC
GACTGCGGCTTGGCACCCCCTGCAGATGAAAGCCAGACCACCACGACAACCCGCCAGACCACCATCACCA
CCACCACCACCACCACCACCACCACAACCACCCCGGTCCATAACAGCGCCAGAAGCCTGGGCCCAGCCAC
CGCCCCGCTGGCTCTGGCGCTGCTGGCCGGAATGCTGATGCTACTACTAGGGGCTCCTGCGGAGTCCTAA

Translation (559 aa):
MQGTWVLLLLGLRLQLSLSVIPVEEENPAFWNKKAAEALDAAKKLQPIQTSAKNLIIFLGDGMGVPTVTA
TRILKGQLEGHLGPETPLAMDRFPYMALSKTYSVDRQVPDSASTATAYLCGVKTNYKTIGVSAAARFDQC
NTTFGNEVFSVMYRAKKAGKSVGVVTTTRVQHASPSGTYVHTVNRNWYGDADMPASALREGCKDIATQLI
SNMDINVILGGGRKYMFPAGTPDPEYPNDANETGTRLDGRNLVQEWLSKHQGSQYVWNREQLIQKAQDPS
VTYLMGLFEPVDTKFDIQRDPLMDPSLKDMTEAAVKVLSRNPKGFYLFVEGGRIDRGHHLGTAYLALTEA
VMFDLAIERASQLTSERDTLTIVTADHSHVFSFGGYTLRGTSIFGLAPLNALDGKPYTSILYGNGPGYVG
TGERPNVTAAESSGSSYRQQAAVPVKSETHGGEDVAIFARGPQAHLLHGVQEQNYIAHVMAFAGCLEPYT
DCGLAPPADESQTTTTTRQTTITTTTTTTTTTTTPVHNSARSLGPATAPLALALLAGMLMLLLGAPAES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH