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Report for CCDS17264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17264.1 Public Mus musculus 3 Agtr1b 23 108 98 CCDS HistoryNCBI Gene:11608Re-query CCDS DB by CCDS ID:17264.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17264.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068316.7 ENSMUSP00000068298.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068316.7Link to Ensembl Protein Viewer:ENSMUSP00000068298.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000068316Re-query CCDS DB by Protein ID:ENSMUSP00000068298
Original member Current member EBI ENSMUST00000163776.2 ENSMUSP00000128724.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163776.2Link to Ensembl Protein Viewer:ENSMUSP00000128724.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000163776Re-query CCDS DB by Protein ID:ENSMUSP00000128724
Original member Current member NCBI NM_175086.3 NP_780295.2 Accepted alive Link to Nucleotide Sequence:NM_175086.3Link to Protein Sequence:NP_780295.2Re-query CCDS DB by Nucleotide ID:NM_175086Re-query CCDS DB by Protein ID:NP_780295Link to BLAST:NP_780295.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780295.2 359 P29755 359 100% 0 0

Chromosomal Locations for CCDS 17264.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 20315361 20316440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGATCCTTAACTCTTCTATTGAAGATGGAATTAAAAGAATCCAAGATGACTGCCCCAAGGCTGGCAGGC
ACAATTACATATTTGTCATGATCCCTACTCTCTACAGCATCATCTTTGTGGTGGGAATATTTGGAAACAG
TTTGGTGGTAATTGTCATTTACTTTTACATGAAGCTAAAGACTGTGGCCAGTGTTTTCCTTCTGAATCTT
GCCCTGGCTGATTTATGCTTTTTGTTGACTTTGCCTCTGTGGGCAGTTTATACCGCTATGGAATACCAGT
GGCCCTTCGGCAATCACCTATGTAAGATCGCTTCGGCCAGCGTCAGTTTCAACCTCTACGCCAGTGTGTT
CCTGCTCACGTGTCTCAGCATCGATCGCTACCTAGCCATTGTCCACCCAATGAAGTCTCGCCTCCGACGC
ACAATGCTGGTCGCCAAAGTCACCTGCATCATCATCTGGCTGATGGCTGGCTTGGCTAGTTTGCCGGCCG
TCATCCACCGAAATGTGTATTTCATCGAGAACACCAATATCACAGTTTGTGCTTTTCATTATGAATCTCA
GAACTCAACACTCCCCATTGGACTGGGTCTGACCAAGAACATTCTGGGCTTCGTGTTCCCTTTCGTTATT
ATTCTCACCAGCTATACTCTGATTTGGAAAGCCCTAAAGAAGGCTTACAAAATTCAGAAGAATACGCCAA
GGAATGATGACATCTTTAGGATAATCATGGCGATTGTGCTTTTCTTCTTCTTTTCCTGGGTTCCCCACCA
AATATTCAGTTTTCTGGATGTGCTCATTCAGCTGGGCGTCATCCATGACTGTGAAATTGCGGACGTAGTG
GACACTGCTATGCCCATCACCATCTGCATAGCTTATTTTAACAATTGCCTGAACCCTCTGTTTTATGGCT
TTCTGGGGAAAAAATTTAAAAGATATTTCCTCCAGCTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCA
TGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACCGCCCTTCAGATAACATGAGCTCGTCTGCCAGG
AAGTCTGCGTATTGTTTTGAAGTGGAGTGA

Translation (359 aa):
MILNSSIEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNL
ALADLCFLLTLPLWAVYTAMEYQWPFGNHLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRR
TMLVAKVTCIIIWLMAGLASLPAVIHRNVYFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFVFPFVI
ILTSYTLIWKALKKAYKIQKNTPRNDDIFRIIMAIVLFFFFSWVPHQIFSFLDVLIQLGVIHDCEIADVV
DTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPPKARSHAGLSTKMSTLSYRPSDNMSSSAR
KSAYCFEVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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