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Report for CCDS9012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9012.1 Public Homo sapiens 12 KRR1 24 110 108 CCDS HistoryNCBI Gene:11103Re-query CCDS DB by CCDS ID:9012.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9012.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000229214.9 ENSP00000229214.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000229214.9Link to Ensembl Protein Viewer:ENSP00000229214.4Re-query CCDS DB by Nucleotide ID:ENST00000229214Re-query CCDS DB by Protein ID:ENSP00000229214
Original member Current member NCBI NM_007043.7 NP_008974.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007043.7Link to Protein Sequence:NP_008974.5Re-query CCDS DB by Nucleotide ID:NM_007043Re-query CCDS DB by Protein ID:NP_008974Link to BLAST:NP_008974.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008974.5 381 Q13601-1 381 100% 0 0

Chromosomal Locations for CCDS 9012.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 75499809 75499951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75501723 75501816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75501923 75502000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75503904 75504074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75505198 75505254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75506316 75506399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75506484 75506609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75506782 75506916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75508274 75508446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75511513 75511597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGCGTCTCCCTCGCTGGAGCGGCCAGAAAAAGGCGCTGGAAAAAGTGAATTTCGTAACCAGAAGCCGA
AGCCGGAGAACCAAGATGAATCAGAACTCCTTACGGTTCCTGATGGTTGGAAGGAACCAGCTTTTTCCAA
AGAGGACAATCCCAGAGGACTTTTGGAGGAGAGCAGTTTCGCAACTTTGTTCCCAAAATACAGGGAAGCT
TACTTGAAAGAGTGTTGGCCATTGGTGCAGAAAGCCTTAAATGAACATCATGTTAATGCAACCCTGGACC
TGATCGAAGGCAGCATGACTGTTTGTACTACAAAGAAGACTTTTGATCCATATATCATCATTAGGGCCAG
AGATCTGATAAAACTGTTAGCAAGGAGTGTTTCATTTGAACAGGCAGTACGAATTCTTCAGGATGATGTT
GCATGTGACATCATTAAAATAGGTTCTTTAGTAAGGAATAAAGAGAGATTTGTAAAACGAAGACAACGGC
TTATTGGTCCCAAAGGATCTACATTGAAGGCATTGGAACTCTTAACTAATTGTTACATTATGGTTCAGGG
AAACACAGTTTCAGCCATTGGACCTTTTAGTGGCTTAAAAGAGGTTAGAAAAGTAGTCCTTGATACTATG
AAGAATATTCATCCAATTTATAACATTAAAAGCTTAATGATTAAGAGAGAGTTGGCAAAAGATTCTGAAT
TACGATCACAAAGTTGGGAGAGATTTTTGCCACAGTTCAAACACAAAAATGTGAATAAACGCAAGGAACC
AAAGAAAAAAACTGTTAAGAAAGAATATACGCCATTCCCACCACCACAACCAGAAAGTCAGATCGATAAA
GAATTGGCTAGTGGTGAATACTTTTTGAAGGCAAATCAGAAGAAGCGGCAGAAAATGGAAGCAATAAAGG
CTAAACAAGCAGAAGCCATCAGTAAGAGACAAGAGGAAAGAAACAAAGCATTTATTCCACCTAAGGAAAA
ACCAATTGTGAAACCTAAGGAAGCTTCTACTGAAACTAAAATTGATGTGGCCAGCATCAAGGAAAAGGTT
AAGAAAGCAAAGAATAAGAAACTGGGAGCTCTTACAGCTGAAGAAATTGCACTTAAGATGGAGGCAGATG
AAAAGAAAAAGAAGAAAAAAAAGTAA

Translation (381 aa):
MASPSLERPEKGAGKSEFRNQKPKPENQDESELLTVPDGWKEPAFSKEDNPRGLLEESSFATLFPKYREA
YLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDV
ACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTM
KNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQIDK
ELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKEASTETKIDVASIKEKV
KKAKNKKLGALTAEEIALKMEADEKKKKKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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