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Report for CCDS38697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38697.1 Public Mus musculus 4 Wwp1 23 108 98 CCDS HistoryNCBI Gene:107568Re-query CCDS DB by CCDS ID:38697.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035982.7 ENSMUSP00000041627.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035982.7Link to Ensembl Protein Viewer:ENSMUSP00000041627.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000035982Re-query CCDS DB by Protein ID:ENSMUSP00000041627
Original member Current member EBI ENSMUST00000108246.8 ENSMUSP00000103881.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108246.8Link to Ensembl Protein Viewer:ENSMUSP00000103881.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108246Re-query CCDS DB by Protein ID:ENSMUSP00000103881
Original member Current member NCBI NM_177327.5 NP_796301.2 Accepted alive Link to Nucleotide Sequence:NM_177327.5Link to Protein Sequence:NP_796301.2Re-query CCDS DB by Nucleotide ID:NM_177327Re-query CCDS DB by Protein ID:NP_796301Link to BLAST:NP_796301.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796301.2 918 Q8BZZ3 918 100% 0 0

Chromosomal Locations for CCDS 38697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 19611714 19611813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19618285 19618357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19619156 19619252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19621928 19622032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19623102 19623222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19627633 19627773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19627872 19628005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19631046 19631205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19635254 19635342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19638605 19638676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19638775 19638850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19639952 19640080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19640195 19640279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19640361 19640415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19641734 19641908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19643366 19643461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19650116 19650440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19659563 19659747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19661966 19662032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19662122 19662259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19672419 19672543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19673156 19673294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 19678345 19678414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2757 nt):
ATGGCCACTGCTTCACCAAGATCTGACACTAGTGATATCCACAGTGGAAGGTTACAGTTAAAGGTAACGG
TTTCTAGTGCCAAACTAAAAAGAAAAAAGAACTGGTTTGGAACAGCAATATATACTGAAGTCATTGTAGA
TGGAGAAGTTAAGAAAACAGCAAAATCCAGTAGTTCCTCTAATCCAAAATGGGACGAGCAGCTGATTGTA
AATGTGACCCCACAGACCACCTTGGAGTTCCGAGTTTGGAGTCACCACACTTTAAAGGCAGATGCTCTAT
TAGGAAAAGCAACAGTGGACTTGAAACAAGTGCTGTTAACACACAACAGAAAATTAGAAAAAGTGAAAGA
ACAATTAAAACTTTCCTTGGAAAACAAGAATGGAATAGTGCAAACTGGGGAACTGACAGTTGTCCTTGAT
GGATTAGTGATTGAGCAAGAGCCTGTAACAAACCGCAGCTCCTCGCCACCCATAGAAATTCAGCAAAATG
GAGATGCCTTACATGAGAATGGAGACCCTGCAACAAGGACAACTCCCAGGTTGCCTGTTGAAGGTACTAT
TGGAATTGATAATCATGTATCAACCAATACTGTTGTTCCCAACTCCTGCTGTTCACATGTAGTTAATGGA
GAAAACACACCTTCATCCCCGTCTCAGGTTGCTGCCAGACCCAAAAATGCTCCAGCTCCAAAGCCAGTCA
CATCTGCGCCCACCAGTGACACGGTTAATGGAGAATCATCATCTGTCCTAGCTGATAATACTTCAACCAT
GGGTACTTTACTACCATCTGAAGATACCACCTCGACTTCCAATTGCACTAGCACCACCACCCAAGAGCCT
CCTGTACAAGAACCCCCAGCATCCTCAGAACACAGTGAATGTATTCCCTCTGCCAGTGCGGAAGTGGGAC
CAGAAGCTCGGAGCCTCATAGACCCTGACTCTGATTCTAGAAATAATTCTGTGTTTGACAAAGTAAGGCA
GCCAGAAGGGTGTGTAGAACCTCTGCGGCCACAGTCTGGAAACACCAACACAGAAGCTTTGCCATCAGGG
TGGGAACAGAGAAAAGATCCTCATGGTAGAACCTATTATGTGGATCATAATACTCGAACTACTACATGGG
AGAGACCACAGCCTTTGCCTCCAGGTTGGGAAAGAAGAGTTGATGATCGTGGAAGAGTTTATTATGTGGA
TCATAACACCAGAACAACAACCTGGCAGCGGCCTACTATGGAATCTGTTCGAAATTTTGAACAGTGGCAG
TCTCAGCGGAATCAATTGCAGGGAGCTATGCAACAATTCAACCAACGATACCTCTATTCGGCTTCCATGT
TAGCTGCAGAAAATGACCCCTATGGACCCTTACCACCGGGCTGGGAAAAAAGAGTGGATTCAACAGACAG
AGTTTACTTTGTGAATCACAATACAAAAACAACCCAGTGGGAAGATCCAAGAACTCAAGGCTTACCAAAT
GAAGAACCCCTGCCCGAAGGCTGGGAAATCAGGTATACTCGGGAAGGTGTTAGGTACTTTGTTGATCATA
ACACGAGAACAACAACATTCAAAGACCCTCGCAATGGGAAGTCATCAGTAACTAAAGGTGGTCCACAGAT
TGCTTATGAACGCAGCTTTAGGTGGAAGCTTGCTCACTTCCGTTACTTGTGCCAGTCTAATGCACTACCG
AGTCATGTAAAGATCAATGTGTCCCGACAGACATTATTTGAAGATTCCTTCCAACAGATTATGGCATTAA
AACCATATGACTTGAGGAGGCGATTATATGTAATATTTAGAGGAGAAGAAGGTCTTGATTATGGTGGCCT
TGCAAGAGAATGGTTTTTCTTGCTTTCCCATGAAGTTTTGAACCCAATGTATTGCTTATTTGAGTATGCA
GGCAAGAATAACTATTGTTTACAGATAAATCCAGCATCAACTATAAATCCTGACCATCTTTCATACTTCT
GTTTTATTGGTCGCTTTATTGCAATGGCACTGTTCCATGGAAAGTTTATTGATACTGGTTTCTCTTTACC
ATTCTACAAGCGTATGCTAAGTAAAAAACTTACTATTAAGGATTTGGAATCTATTGATACTGAATTTTAC
AACTCTCTAATCTGGATAAGAGATAACAATATTGAAGAATGTGGCTTAGAAATGTACTTTTCTGTAGACA
TGGAGATTCTGGGAAAAGTTACTTCACATGATTTAAAGTTGGGAGGTTCCAATATCCTGGTGACGGAAGA
AAACAAAGATGAATATATTGGTTTAATGACAGAATGGCGTTTTTCTCGAGGAGTACAAGAACAGACCAAA
GCTTTCCTTGATGGGTTTAATGAAGTTGTTCCCCTTCAGTGGCTACAGTACTTTGATGAAAAAGAATTGG
AGGTTATGCTGTGTGGCATGCAAGAGGTTGACTTGGCAGACTGGCAGAGAAATACTGTTTATCGACATTA
TACAAGAAACAGCAAGCAAATTATTTGGTTTTGGCAGTTTGTGAAAGAGACTGATAATGAAGTACGAATG
CGACTCTTGCAGTTTGTGACTGGAACCTGTCGCTTGCCTCTAGGAGGATTTGCTGAGCTCATGGGAAGTA
ATGGGCCTCAAAAGTTCTGTATTGAAAAAGTTGGCAAAGACACCTGGTTACCAAGAAGCCATACATGTTT
TAATCGCTTGGATCTACCACCATATAAGAGTTATGAACAACTAAAGGAAAAACTTCTTTTTGCAATAGAA
GAGACAGAGGGATTTGGACAAGAATGA

Translation (918 aa):
MATASPRSDTSDIHSGRLQLKVTVSSAKLKRKKNWFGTAIYTEVIVDGEVKKTAKSSSSSNPKWDEQLIV
NVTPQTTLEFRVWSHHTLKADALLGKATVDLKQVLLTHNRKLEKVKEQLKLSLENKNGIVQTGELTVVLD
GLVIEQEPVTNRSSSPPIEIQQNGDALHENGDPATRTTPRLPVEGTIGIDNHVSTNTVVPNSCCSHVVNG
ENTPSSPSQVAARPKNAPAPKPVTSAPTSDTVNGESSSVLADNTSTMGTLLPSEDTTSTSNCTSTTTQEP
PVQEPPASSEHSECIPSASAEVGPEARSLIDPDSDSRNNSVFDKVRQPEGCVEPLRPQSGNTNTEALPSG
WEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQ
SQRNQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLPN
EEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQSNALP
SHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYA
GKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFY
NSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTK
AFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRM
RLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIE
ETEGFGQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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