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Report for CCDS89693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89693.1 Public Mus musculus 3 Adh6b 23 108 98 CCDS HistoryNCBI Gene:100417514Re-query CCDS DB by CCDS ID:89693.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89693.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000199673.5 ENSMUSP00000148703.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000199673.5Link to Ensembl Protein Viewer:ENSMUSP00000148703.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000199673Re-query CCDS DB by Protein ID:ENSMUSP00000148703
Original member NCBI NM_001370857.1 NP_001357786.1 Updated not alive Link to Nucleotide Sequence:NM_001370857.1Link to Protein Sequence:NP_001357786.1Re-query CCDS DB by Nucleotide ID:NM_001370857Re-query CCDS DB by Protein ID:NP_001357786
Current member NCBI NM_001370857.2 NP_001357786.1 Accepted alive Link to Nucleotide Sequence:NM_001370857.2Link to Protein Sequence:NP_001357786.1Re-query CCDS DB by Nucleotide ID:NM_001370857Re-query CCDS DB by Protein ID:NP_001357786Link to BLAST:NP_001357786.1

Chromosomal Locations for CCDS 89693.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138342859 138342897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138344069 138344170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138349632 138349770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138352168 138352255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138352380 138352599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138352781 138353041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138354002 138354137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138357647 138357785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138358674 138358704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGAACAAGCCAGCCTCGCCACAAAAACATCCAGCAATGTCATCAGATGCCGGGCAGCTGTTGCCTGGA
CCACTAATGCCCCGCTGTCCATTGAGGAGGTTGAAGTTGATCCACCAAAGGCTGGTGAGGTTCGAGTTAA
GATTATAGCCTCTGGGATCTGTGGCACTGATAATCATACCTTAGAAGGGAAAATGAAAACGCCATTTCCT
GTCATCCTGGGCCACGAGGGAGCTGGAGTTGTGGAGAGTGTTGGACCAGGTGTAACCACTGTAAAGCCAG
GAGATAAAGTCTTAATGTTCCCTCTTCCGGAATGTCGAGAATGCTTCTACTGCCTCTACCCTAAGGGCAA
CTTCTGTGAGAAAGAAAATATTCTCTCTCCAACTGGATTAATGTTGGATGGAACCAGCAGATTTACCTGC
AGAGGGAAGAAAATCTATAATATAATGGGGACCAGCACGTTCACGGAATATACTGTGGTGCATGAGATTG
CAGTGGCGAAGATCGAGGCTGCTGCCCCTATGGATACAGTCTGCATCATGAGCTGCGCGGTGCCGACAGG
CTTTGGAGCTGTGTTTAACACAGCTCAGGTCACCCCTGGCTCTTCCTGTGTGGTGTTTGGACTCGGAGGA
ATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACATCAATG
AGGAGAAATTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAAGAAGCC
TGTGCAGGAGGTGGTGAAGGAAATGACAGGGGTTGGTGTTGACTTTGCCTTTGAGGCCATCGGACTCATT
GAAACCATGGTTGCGGCTTTGAAGTCATGCAATAGGAGCTACGGAGTGTGTGTGATTATGGGAGTAGCTC
CGACCGGTTCCCAGCTCTCTTTTGACCCATTGGTACTTCTCCCTGGAAGAACCCTAAAATCTTCTGTTTT
GGGAGGGTATAAAACCAGAGATGACATCCCTAAACTAGTAACTGACTACGTTCAAAAGAAAATTAATATA
GATCCTCTTATAACCCATAGACTGCCTTTCCCAAAAATCAATGAAGGATTCAGATTGTTGCAAGAGGGAA
AATGCATCCGTTGTGTCCTCTCTATGAGACCCTGA

Translation (384 aa):
MEQASLATKTSSNVIRCRAAVAWTTNAPLSIEEVEVDPPKAGEVRVKIIASGICGTDNHTLEGKMKTPFP
VILGHEGAGVVESVGPGVTTVKPGDKVLMFPLPECRECFYCLYPKGNFCEKENILSPTGLMLDGTSRFTC
RGKKIYNIMGTSTFTEYTVVHEIAVAKIEAAAPMDTVCIMSCAVPTGFGAVFNTAQVTPGSSCVVFGLGG
IGSAIVMACKASGACRIIGVDINEEKFPRARALGVTDCLNPNKLKKPVQEVVKEMTGVGVDFAFEAIGLI
ETMVAALKSCNRSYGVCVIMGVAPTGSQLSFDPLVLLPGRTLKSSVLGGYKTRDDIPKLVTDYVQKKINI
DPLITHRLPFPKINEGFRLLQEGKCIRCVLSMRP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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