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Report for CCDS94385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94385.1 Public Homo sapiens 9 NFIB 24 110 108 CCDS HistoryNCBI Gene:4781Re-query CCDS DB by CCDS ID:94385.1Re-query CCDS DB by GeneID:4781See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94385.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397579.6 ENSP00000380709.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397579.6Link to Ensembl Protein Viewer:ENSP00000380709.2Re-query CCDS DB by Nucleotide ID:ENST00000397579Re-query CCDS DB by Protein ID:ENSP00000380709
Original member Current member NCBI NM_001369464.1 NP_001356393.1 Accepted alive Link to Nucleotide Sequence:NM_001369464.1Link to Protein Sequence:NP_001356393.1Re-query CCDS DB by Nucleotide ID:NM_001369464Re-query CCDS DB by Protein ID:NP_001356393Link to BLAST:NP_001356393.1

Chromosomal Locations for CCDS 94385.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 14088197 14088326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14102422 14102510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14120440 14120624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14125632 14125766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14146689 14146807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14150145 14150265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14155825 14155893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14179727 14179780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14306989 14307520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 14313482 14313511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1464 nt):
ATGATGTATTCTCCCATCTGTCTCACTCAGGATGAATTTCACCCATTCATCGAGGCACTTCTTCCACATG
TC
CGTGCAATTGCCTATACTTGGTTCAACCTGCAGGCTCGAAAACGCAAGTACTTTAAAAAGCATGAGAA
G
CGAATGTCAAAGGATGAAGAAAGAGCAGTCAAAGATGAGCTTCTCAGTGAAAAGCCTGAAATCAAACAG
AAG
TGGGCATCCAGGCTCCTTGCCAAACTGCGCAAAGATATTCGCCAGGAGTATCGAGAGGACTTTGTGC
TC
ACCGTGACTGGCAAGAAGCACCCGTGCTGTGTCTTATCCAATCCCGACCAGAAGGGTAAGATTAGGAG
A
ATCGACTGCCTGCGACAGGCAGACAAAGTCTGGCGTCTGGATCTAGTCATGGTGATCCTGTTCAAAGGC
ATC
CCCTTGGAAAGTACCGATGGAGAGCGGCTCATGAAATCCCCACATTGCACAAACCCAGCACTTTGTG
TC
CAGCCACATCATATCACAGTATCAGTTAAGGAGCTTGATTTGTTTTTGGCATACTACGTGCAGGAGCA
A
GATTCTGGACAATCAGGAAGTCCAAGCCACAATGATCCTGCCAAGAATCCTCCAGGTTACCTTGAGGAT
AGT
TTTGTAAAATCTGGAGTCTTCAATGTATCAGAACTTGTAAGAGTATCCAGAACGCCCATAACCCAGG
GA
ACTGGAGTCAACTTCCCAATTGGAGAAATCCCAAGCCAACCATACTATCATGACATGAACTCGGGGGT
C
AATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCAAAAGACCCAAAACTATATCCATAGATGAAAAT
ATG
GAACCAAGTCCTACAGGAGACTTTTACCCCTCTCCAAGTTCACCAGCTGCTGGAAGTCGAACATGGC
AC
GAAAGAGATCAAGATATGTCTTCTCCGACTACTATGAAGAAGCCTGAAAAGCCATTGTTCAGCTCTGC
A
TCTCCACAGGATTCTTCCCCAAGACTGAGCACTTTCCCCCAGCACCACCATCCCGGAATACCTGGAGTT
GCA
CACAGTGTCATCTCAACTCGAACTCCACCTCCACCTTCACCGTTGCCATTTCCAACACAAGCTATCC
TT
CCTCCAGCCCCATCGAGCTACTTTTCTCATCCAACAATCAGATATCCTCCCCACCTGAATCCTCAGGA
T
ACTCTGAAGAACTATGTACCTTCTTATGACCCATCCAGTCCACAAACCAGCCAGCTGAGGATTTGTGAC
TGG
ACCATGAATCAAAACGGCAGGCATTTATACCCCAGTACCAGTGAGGATACATTGGGAATTACTTGGC
AA
AGTCCTGGTACCTGGGCTAGCTTGGTTCCTTTCCAAGTGTCAAATAGGACACCCATCTTACCGGCCAA
T
GTCCAAAATTACGGTTTGAACATAATTGGAGAACCTTTCCTTCAAGCAGAAACAAGCAACTGA


Translation (487 aa):
MMYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLSEKPEIKQ
K
WASRLLAKLRKDIRQEYREDFVLTVTGKKHPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKG
I
PLESTDGERLMKSPHCTNPALCVQPHHITVSVKELDLFLAYYVQEQ
DSGQSGSPSHNDPAKNPPGYLED
S
FVKSGVFNVSELVRVSR
TPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTISIDEN
M
EPSPTGDFYPSPSSPAAGSRTWHERDQ
DMSSPTTMKKPEKPLFSSASPQDSSPRLSTFPQHHHPGIPGV
A
HS
VISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNYVPSYDPSSPQTSQLRICD
W
TMNQNGRHLYPSTSEDTLGITWQ
SPGTWASLVPFQVSNRTPILPANVQNYGLNIIGEPFLQAETSN



Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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