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Report for CCDS9388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9388.1 Public Homo sapiens 13 DNAJC15 24 110 108 CCDS HistoryNCBI Gene:29103Re-query CCDS DB by CCDS ID:9388.1Re-query CCDS DB by GeneID:29103See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379221.4 ENSP00000368523.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379221.4Link to Ensembl Protein Viewer:ENSP00000368523.2Re-query CCDS DB by Nucleotide ID:ENST00000379221Re-query CCDS DB by Protein ID:ENSP00000368523
Original member Current member NCBI NM_013238.3 NP_037370.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013238.3Link to Protein Sequence:NP_037370.2Re-query CCDS DB by Nucleotide ID:NM_013238Re-query CCDS DB by Protein ID:NP_037370Link to BLAST:NP_037370.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037370.2 150 Q9Y5T4 150 100% 0 0

Chromosomal Locations for CCDS 9388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 43023627 43023734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 43065686 43065737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 43068930 43069003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 43078612 43078688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 43085768 43085838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 43107178 43107248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGCTGCCCGTGGTGTCATCGCTCCAGTTGGCGAGAGTTTGCGCTACGCTGAGTACTTGCAGCCCTCGG
CCAAACGGCCAGACGCCGACGTCGACCAGCAGAGACTGGTAAGAAGTTTGATAGCTGTAGGACTGGGTGT
TGCAGCTCTTGCATTTGCAGGTCGCTACGCATTTCGGATCTGGAAACCTCTAGAACAAGTTATCACAGAA
ACTGCAAAGAAGATTTCAACTCCTAGCTTTTCATCCTACTATAAAGGAGGATTTGAACAGAAAATGAGTA
GGCGAGAAGCTGGTCTTATTTTAGGTGTAAGCCCATCTGCTGGCAAGGCTAAGATTAGAACAGCTCATAG
GAGAGTCATGATTTTGAATCACCCAGATAAAGGTGGATCTCCTTACGTAGCAGCCAAAATAAATGAAGCA
AAAGACTTGCTAGAAACAACCACCAAACATTGA

Translation (150 aa):
MAARGVIAPVGESLRYAEYLQPSAKRPDADVDQQRLVRSLIAVGLGVAALAFAGRYAFRIWKPLEQVITE
TAKKISTPSFSSYYKGGFEQKMSRREAGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEA
KDLLETTTKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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