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Report for CCDS93869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93869.1 Public Homo sapiens 6 C6orf62 24 110 108 CCDS HistoryNCBI Gene:81688Re-query CCDS DB by CCDS ID:93869.1Re-query CCDS DB by GeneID:81688See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378102.3 ENSP00000367342.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378102.3Link to Ensembl Protein Viewer:ENSP00000367342.3Re-query CCDS DB by Nucleotide ID:ENST00000378102Re-query CCDS DB by Protein ID:ENSP00000367342
Current member NCBI NM_001410835.1 NP_001397764.1 Accepted alive Link to Nucleotide Sequence:NM_001410835.1Link to Protein Sequence:NP_001397764.1Re-query CCDS DB by Nucleotide ID:NM_001410835Re-query CCDS DB by Protein ID:NP_001397764Link to BLAST:NP_001397764.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397764.1 200 Q9GZU0-2 200 100% 0 0

Chromosomal Locations for CCDS 93869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24706137 24706262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24708777 24708911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24714318 24714440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24716148 24716324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24719860 24719901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGAGTGAAAACCTGAGTGATCCTGTGTCTCCCGTGGTGCGAAAGAAAAAGTCAGCACTTTTTGAAGTGT
CTGAGGTTATACCAGTCATGACAAATAATTATGAAGAAAATATCCTGAAAGGTGTGCGAGATTCCAGCTA
TTCCTTGGAAAGTTCCCTAGAGCTTTTACAGAAGGATGTGGTACAGCTCCATGCTCCTCGATATCAGTCT
ATGAGAAGGGATGTAATTGGCTGTACTCAGGAGATGGATTTCATTCTTTGGCCTCGGAATGATATTGAAA
AAATCGTCTGTCTCCTGTTTTCTAGGTGGAAAGAATCTGATGAGCCTTTTAGGCCTGTTCAGGCCAAATT
TGAGTTTCATCATGGTGACTATGAAAAACAGTTTCTGCATGTACTGAGCCGCAAGGACAAGACTGGAATC
GTTGTCAACAATCCTAACCAGTCAGTGTTTCTCTTCATTGACAGACAGCACTTGCAGACTCCAAAAAACA
AAGCTACAATCTTCAAGTTATGCAGCATCTGCCTCTACCTGCCACAGGAACAGCTCACCCACTGGGCAGT
TGGCACCATAGAGGATCACCTCCGTCCTTATATGCCAGAGTAG

Translation (200 aa):
MSENLSDPVSPVVRKKKSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSLELLQKDVVQLHAPRYQS
MRRDVIGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHVLSRKDKTGI
VVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGTIEDHLRPYMPE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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