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Report for CCDS9321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9321.1 Public Homo sapiens 13 RASL11A 24 110 108 CCDS HistoryNCBI Gene:387496Re-query CCDS DB by CCDS ID:9321.1Re-query CCDS DB by GeneID:387496See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9321.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000241463.5 ENSP00000241463.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000241463.5Link to Ensembl Protein Viewer:ENSP00000241463.5Re-query CCDS DB by Nucleotide ID:ENST00000241463Re-query CCDS DB by Protein ID:ENSP00000241463
Original member Current member NCBI NM_206827.2 NP_996563.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206827.2Link to Protein Sequence:NP_996563.1Re-query CCDS DB by Nucleotide ID:NM_206827Re-query CCDS DB by Protein ID:NP_996563Link to BLAST:NP_996563.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996563.1 242 Q6T310 242 100% 0 0

Chromosomal Locations for CCDS 9321.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 27270945 27271068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 27271484 27271540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 27271639 27271718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 27273027 27273494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGCGGCCGCTCAGCATGTCCGGGCACTTTCTGCTCGCACCCATCCCCGAGTCCTCCTCGGACTACCTAC
TGCCCAAGGACATCAAACTGGCGGTGCTGGGCGCCGGCCGCGTGGGCAAGAGCGCAATGATCGTGCGCTT
CCTGACCAAGAGATTCATTGGAGACTATGAACCGAATACAGGCAAGCTGTATTCACGGCTGGTCTATGTC
GAGGGGGACCAGCTCTCCCTGCAGATCCAGGATACTCCCGGGGGCGTCCAGATCCAAGACAGCCTCCCCC
AGGTCGTCGATTCCCTGTCCAAATGCGTGCAGTGGGCCGAGGGTTTTCTGCTGGTCTATTCCATCACAGA
CTATGACAGCTACTTGTCCATCCGACCCCTTTATCAGCACATCCGGAAGGTCCACCCTGACTCTAAAGCC
CCTGTCATCATCGTGGGCAACAAGGGGGACCTTTTGCATGCCCGGCAGGTGCAGACACAGGACGGTATTC
AGCTAGCCAATGAGCTGGGCAGCCTGTTCCTTGAAATTTCCACTAGCGAAAACTACGAAGATGTCTGTGA
TGTGTTTCAGCATCTCTGCAAAGAAGTGAGCAAGATGCACGGCCTCAGTGGGGAAAGAAGAAGAGCCTCC
ATCATCCCTCGGCCCCGCTCTCCCAACATGCAGGACCTGAAGAGACGCTTCAAGCAGGCTCTGTCTCCCA
AAGTCAAAGCCCCCTCTGCACTGGGGTGA

Translation (242 aa):
MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYV
EGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIRKVHPDSKA
PVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHLCKEVSKMHGLSGERRRAS
IIPRPRSPNMQDLKRRFKQALSPKVKAPSALG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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