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Report for CCDS91398.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91398.1 Public Homo sapiens 11 DEAF1 24 110 108 CCDS HistoryNCBI Gene:10522Re-query CCDS DB by CCDS ID:91398.1Re-query CCDS DB by GeneID:10522See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91398.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000683307.1 ENSP00000507198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683307.1Link to Ensembl Protein Viewer:ENSP00000507198.1Re-query CCDS DB by Nucleotide ID:ENST00000683307Re-query CCDS DB by Protein ID:ENSP00000507198
Original member Current member NCBI NM_001367390.1 NP_001354319.1 Accepted alive Link to Nucleotide Sequence:NM_001367390.1Link to Protein Sequence:NP_001354319.1Re-query CCDS DB by Nucleotide ID:NM_001367390Re-query CCDS DB by Protein ID:NP_001354319Link to BLAST:NP_001354319.1

Chromosomal Locations for CCDS 91398.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 644550 644654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 653962 654051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 674536 674783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 678694 678822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 679688 679816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 680963 681089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 684898 684963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 686858 686935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGCAGGAAGAGCCAGCAGTAAGGACTGGAAAAGAAGCATTCGCTACGCGGGCCGACCCTTGCAGTGCC
TCATCCAGGATGGGATCTTAAACCCTCACGCTGCCTCTTGCACCTGTGCTGCCTGCTGCGACGACATGAC
CTTAAGTGGCCCAGTCAGGCTTTTTGTGCCTTACAAAAGGCGCAAGAAGGAGAATGAACTGCCCACAACT
CCCGTGAAGAAGGACTCCCCCAAGAACATCACATTGCTTCCAGCCACCGCGGCTACCACCTTCACCGTGA
CCCCCTCGGGACAGATCACGACCTCGGGGGCACTGACCTTTGACCGAGCGTCCACGGTAGAGGCCACTGC
TGTCATATCAGAGAGTCCGGCCCAGGGCGACGTCTTCGCAGGGGCCACAGTCCAAGAGGCCAGCGTGCAG
CCCCCATGCAGGGCCAGCCACCCTGAGCCTCACTACCCCGGCTATCAGGACAGCTGCCAGATCGCACCGT
TTCCAGAAGCTGCGTTGCCAACGTCACATCCCAAAATAGTGTTGACATCCCTGCCTGCGCTGGCGGTCCC
ACCCCCGACTCCCACCAAAGCGGCACCTCCCGCGTTGGTCAATGGGCTGGAGCTGTCAGAGCCGCGGAGC
TGGCTGTACCTAGAAGAGATGGTCAACTCCTTGCTCAACACAGCGCAGCAGCTGAAGACGCTGTTTGAGC
AAGCCAAGCATGCCAGCACCTACCGAGAAGCTGCCACAAACCAGGCCAAGATCCACGCTGACGCAGAGCG
GAAGGAGCAGTCCTGCGTTAACTGCGGCCGGGAGGCTATGAGCGAGTGCACCGGCTGCCACAAGGTCAAC
TACTGCTCCACCTTCTGCCAACGCAAGGACTGGAAGGATCACCAGCACATATGCGGCCAGTCAGCAGCTG
TCACCGTCCAGGCAGACGAAGTCCACGTGGCTGAAAGCGTGATGGAGAAGGTGACCGTGTGA

Translation (323 aa):
MAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRRKKENELPTT
PVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQ
PPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLELSEPRS
WLYLEEMVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVN
YCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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