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Report for CCDS90332.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90332.1 Public Mus musculus 7 Maz 23 108 98 CCDS HistoryNCBI Gene:17188Re-query CCDS DB by CCDS ID:90332.1Re-query CCDS DB by GeneID:17188See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90332.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000205568.1 ENSMUSP00000145619.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000205568.1Link to Ensembl Protein Viewer:ENSMUSP00000145619.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000205568Re-query CCDS DB by Protein ID:ENSMUSP00000145619
Current member NCBI NM_001372522.1 NP_001359451.1 Accepted alive Link to Nucleotide Sequence:NM_001372522.1Link to Protein Sequence:NP_001359451.1Re-query CCDS DB by Nucleotide ID:NM_001372522Re-query CCDS DB by Protein ID:NP_001359451Link to BLAST:NP_001359451.1
Current member NCBI NM_001372523.1 NP_001359452.1 Accepted alive Link to Nucleotide Sequence:NM_001372523.1Link to Protein Sequence:NP_001359452.1Re-query CCDS DB by Nucleotide ID:NM_001372523Re-query CCDS DB by Protein ID:NP_001359452Link to BLAST:NP_001359452.1

Chromosomal Locations for CCDS 90332.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127023504 127023706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127024444 127024615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127024876 127024939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127025304 127026154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127026228 127026419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGTTCCCCGTGTTCCCTTGCACGCTGCTGGCCCCCCCCTTCCCCGTGCTGGGCCTGGACTCCCGGGGGG
TGGGCGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCCCAGAACCCCCTGCAGGTCGGGGCTGA
GCTCCAGTCCCGCTTCTTTGCCTCCCAGGGCTGCGCCCAGAGTCCATTCCAGGCCGCGCCGGCGCCCCCA
CCCACGCCCCAGGCCCCGGCGGCCGAGCCCCTCCAAGTGGACTTGCTCCCGGTTCTCGCCGCCGCGCAGG
AATCAGCCGCGGCGGCGGCGGCTGCTGCGGCGGCTGCCGCTGCAGTGGTTACTGCACCCCCGGCCCCTGC
CGCCGCCTCCACAGTGGACACAGCGGCCCTGAAGCAGCCTCCGGCGCCTCCTCCGCCACCCCCTGCCGTC
TCCGCACCAGCCGCCGAGGCCGCGCCCCCCGCCGCGGCCGCCACTATCGCAGCAGCGGCTGCCACCGCTG
TCGTCGCCCCAACCTCGACGGTCGCCGTGGCCCCAGTTGCATCTGTCTTGGAGAAGAAGACAAAGAGCAA
GGGGCCCTACATTTGCGCCCTGTGCGCCAAGGAGTTCAAGAACGGCTACAACCTCCGAAGGCACGAAGCC
ATCCACACGGGAGCCAAGGCTGGCCGGGTCCCTTCGGGTGCTATGAAGATGCCCACCATGGTGCCCCTGA
GCCTCTTGAGTGTCCCCCAGCTGAGCGGGGCCAGCGGGGGTGGGGGAGAAGCCGGGGCTGGCGGCGGCAC
AGCCGCGGTGGCGGCCGGTGGCGTTGTGACCACGACTGCCTCTGGGAAGCGCATCCGGAAGAATCACGCC
TGCGAGATGTGCGGCAAGGCCTTCCGCGACGTCTACCACCTGAACCGACATAAGCTGTCGCATTCGGACG
AGAAGCCCTACCAGTGCCCTGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGTTACCACGTGCG
CTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAAGAGCTTCTCCCGGCCGGAT
CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAGCGGCCCTTCAAATGTGAGAAATGTGAGGCAG
CTTTTGCTACGAAGGATCGCCTCCGAGCGCACACAGTCCGACACGAGGAGAAGGTGCCATGTCATGTCTG
TGGCAAGATGCTGAGCTCGGCTTATATTTCCGACCACATGAAGGTGCACAGCCAGGGCCCTCACCATGTC
TGTGAGCTCTGCAACAAAGGCTTCACCACAGCAGCATACCTGCGCATCCACGCGGTGAAGGACCATGGGC
TCCAGGCCCCGCGGGCTGACCGCATCCTGTGTAAGCTGTGCAGCGTGCACTGCAAGACCCCTGCCCAGCT
GGCCGGCCACATGCAGACCCATCTGGGGGGGGCCGCCCCTCCTATCCCGGGAGATGCCCCCCAGCCACAG
CCTACCTGCTGA

Translation (493 aa):
MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQSPFQAAPAPP
PTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVVTAPPAPAAASTVDTAALKQPPAPPPPPPAV
SAPAAEAAPPAAAATIAAAAATAVVAPTSTVAVAPVASVLEKKTKSKGPYICALCAKEFKNGYNLRRHEA
IHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGASGGGGEAGAGGGTAAVAAGGVVTTTASGKRIRKNHA
CEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPD
HLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
CELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPIPGDAPQPQ
PTC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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