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Report for CCDS90199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90199.1 Public Mus musculus 7 Zfp30 23 108 98 CCDS HistoryNCBI Gene:22693Re-query CCDS DB by CCDS ID:90199.1Re-query CCDS DB by GeneID:22693See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90199.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000122387.1 ENSMUSP00000113426.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122387.1Link to Ensembl Protein Viewer:ENSMUSP00000113426.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122387Re-query CCDS DB by Protein ID:ENSMUSP00000113426
Original member Current member NCBI NM_001360210.1 NP_001347139.1 Accepted alive Link to Nucleotide Sequence:NM_001360210.1Link to Protein Sequence:NP_001347139.1Re-query CCDS DB by Nucleotide ID:NM_001360210Re-query CCDS DB by Protein ID:NP_001347139Link to BLAST:NP_001347139.1
Original member Current member NCBI NM_001360212.1 NP_001347141.1 Accepted alive Link to Nucleotide Sequence:NM_001360212.1Link to Protein Sequence:NP_001347141.1Re-query CCDS DB by Nucleotide ID:NM_001360212Re-query CCDS DB by Protein ID:NP_001347141Link to BLAST:NP_001347141.1
Original member Current member NCBI NM_001360213.1 NP_001347142.1 Accepted alive Link to Nucleotide Sequence:NM_001360213.1Link to Protein Sequence:NP_001347142.1Re-query CCDS DB by Nucleotide ID:NM_001360213Re-query CCDS DB by Protein ID:NP_001347142Link to BLAST:NP_001347142.1

Chromosomal Locations for CCDS 90199.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29789400 29789436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29792360 29793726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGATTGTGAGGGCTGAGAAGAGAAGGTGGAGCCGAGATCTGGAATCCAGATACAGCAGTAACGGGTTAC
TTCCAGAAAAGAATACTTACGAAATTAATCTATCTCCGTGGGAAATAATGGGAAGAATTCAAAGGCGTGG
CCCCGAAGACTCCCTTTTGGGGAAAGACTTTGAATATAAAATATATGAAGAACAAGAGAACTCTCATAGG
GTATATTTCAGACACGTGATAAAAACCACCTCTGGAAAAAGACCTCGGTACAGAAAACGCACACCTGTTA
GTCTCTATCAGAAAACTCCTAACGGAGAAAAGCCCTACGAATGTGGGGAGTGTGGGAAGGCTTTCAAAGT
CCGCCAACAACTTACTTTCCATCAGAGGATCCACACCGGCGAGAAGCCCTACGAATGCAAGGAATGTGGC
AAAGCCTTCCGACAGTGCGCCCACCTCAGTCGCCATCAGAGGATCCACGCCTCTGACAAGCTCTATGAAT
GTAAGAAGTGTGCAAAGATCTTCACGTGTAGCTCGGACCTTCGAGGGCATCAGAGGTCTCACGTGGGCGA
GAAGCCCTACGATTGTAAAGAGTGCGGGAAGGCCTTTCGAGTCCGTGGACAGCTCATGCTCCACCAGAGG
ATCCACACCGGTGAGAAGCCCTACGCATGCACGGAGTGCGGCAAGAGCTTCCGGCAGGTAGCGCACCTCA
CTCGGCATCAGAGGCTCAACAGTGGCAGCTCACGCCACGAGTGTAAGGAGTGCGGCCGGGCTTTCCTGTG
CAGCACGGGCCTCCGGCTGCATCACAAACTGCACACGGGAGAGAAACCCTACGACTGCAAGGAGTGTGGG
AAGGCGTTCCGGGTGAGGCAGCAGCTCACCCTGCACGAGAGGATCCACACCGGCGAGAAGCCCTTCGACT
GCAAGGAGTGCGGGAAGACCTTCAGCCGCGGCTACCATCTCACCCTCCACCAGAGGATCCACACTGGGGA
GAAGCCTTACGAGTGTAAGGAGTGCCGCAAGTTCTTCCGCCGGTACTCGGAGCTCATTTCCCACCAGGGC
ATTCACATCGGGGAGAAACCCTATGACTGCAAGGAGTGCGGAAAGGCTTTTAGGCTGTTCTCCCAGCTGA
CTCAGCACCAGAGCATTCATTTTGGTGAGAAGCCCTATAAATGTATGGAATGTGAGAAGACTTTCAGACT
CCTCTCACAACTGACGCAGCATCAGAGCATTCACACGGGCGAGAAGCCTTACGATTGTAAGGAGTGCGGG
AAAGCCTTTCGCCTCCACTCGTCTCTCATTCAGCACCAGAGAATCCACTCTGGCGAGAAGCCGTACAAAT
GTACGGAGTGTAAGAAGGCCTTCCGTCAACACTCACACCTCACCTACCATCAGCGAATTCATAAGAATTT
GTAA

Translation (467 aa):
MIVRAEKRRWSRDLESRYSSNGLLPEKNTYEINLSPWEIMGRIQRRGPEDSLLGKDFEYKIYEEQENSHR
VYFRHVIKTTSGKRPRYRKRTPVSLYQKTPNGEKPYECGECGKAFKVRQQLTFHQRIHTGEKPYECKECG
KAFRQCAHLSRHQRIHASDKLYECKKCAKIFTCSSDLRGHQRSHVGEKPYDCKECGKAFRVRGQLMLHQR
IHTGEKPYACTECGKSFRQVAHLTRHQRLNSGSSRHECKECGRAFLCSTGLRLHHKLHTGEKPYDCKECG
KAFRVRQQLTLHERIHTGEKPFDCKECGKTFSRGYHLTLHQRIHTGEKPYECKECRKFFRRYSELISHQG
IHIGEKPYDCKECGKAFRLFSQLTQHQSIHFGEKPYKCMECEKTFRLLSQLTQHQSIHTGEKPYDCKECG
KAFRLHSSLIQHQRIHSGEKPYKCTECKKAFRQHSHLTYHQRIHKNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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