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Report for CCDS89864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89864.1 Public Mus musculus 4 Gpr153 23 108 98 CCDS HistoryNCBI Gene:100129Re-query CCDS DB by CCDS ID:89864.1Re-query CCDS DB by GeneID:100129See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89864.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105650.7 ENSMUSP00000101275.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105650.7Link to Ensembl Protein Viewer:ENSMUSP00000101275.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105650Re-query CCDS DB by Protein ID:ENSMUSP00000101275
Current member NCBI NM_001374784.1 NP_001361713.1 Accepted alive Link to Nucleotide Sequence:NM_001374784.1Link to Protein Sequence:NP_001361713.1Re-query CCDS DB by Nucleotide ID:NM_001374784Re-query CCDS DB by Protein ID:NP_001361713Link to BLAST:NP_001361713.1

Chromosomal Locations for CCDS 89864.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 152279125 152279480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152279845 152280274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152281766 152281958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152282371 152282555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 152282927 152283589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGAGTGATGAGCGGAGGCTGCCCAGCAGTGCGGTAGGTTGGCTAGCATGCGGAGGTCTGTCGCTGCTAG
CCAACGCCTGGGGCATCCTCAGTGTGGGTGCCAAGCAGAAGAAGTGGAAGCCGCTGGAGTTCTTGCTTTG
CACGCTGGCAGCCACCCACATGCTCAATGTGGCGGTACCCATCGCCACATATGCTGTGGTGCAGCTGCGG
AGGCAACGTCCCGACTACGAGTGGAACGAGGGCCTCTGTAAGGTCTTCGTGTCGACATTCTACACCCTCA
CACTGGCCACCTGCTTCTCTGTCACCTCCATCTCCTACCACCGCATGTGGATGGTCCGATGGCCAGTCAA
CTACCGGCTGAGCAACGCCAAGAAGCAGGCGGTGCACACAGTTATGGGCATCTGGATGGTGTCCTTCATC
CTGTCGGCCCTTCCTGCCGTTGGCTGGCACGACACGAGCGAGCGTTTCTACACCCACGGCTGCCGCTTCA
TCGTGGCCGAGATTGGCCTGGGCTTCGGCGTCTGCTTCTTGCTGCTGGTGGGAGGCAGCGTGGCCATGGG
CATGGTCTGCACAGCCATTGCCCTCTTCCAGACACTGGCCACGCAGGTGGGGCACCGGGCTGACCGCCGC
ACCTTCACCGTGCCCACCATCGTGGTGGAAGACGCACAGGGCAAGCGTCGCTCCTCCATTGATGGCTCAG
AGCCTGCCAGAACTTCGCTACAGATCACGGGCCTTGTGGCCACCATTGTGGTCATCTATGACTGCCTCAT
GGGTTTCCCTGTGCTGGTGGTGAGCTTCAGTAGTCTGCGGGCAGATGCTTCAGCACCCTGGATGGCGCTC
TGTGTCCTGTGGTGCTCCGTGACCCAGGCCCTGCTGCTGCCTCTGTTCCTCTGGACTTGTGATCGTTACC
GGGCGGATCTCAAGGCAGTCTGGGAGAAGTGTGTGGCCCTTATGGCCAACGACGAAGATTCTGACAATGA
GACCAGTCTAGAGGGCAGCATCTCCCCCGACATGGTATTGGAGCGCTCTCTTGACTATAGCTATGGAGGT
GACTTCGTGGCTCTGGACAGGATGGCCAAGTATGAACTCTCTGCCCTGGAAGGAGGCTTACCACAGCTCT
ACCCTCTGCGGCCACTGCAGGAGGATCGGATGCAGTATCTGCAGGTCCCGCCCACCCGGCGGTTCTCCCA
CGATGATGCCGACGTGTGGGCAGCCGTCCCGCTGCCCACCTTCCTGCCACGCTGGAGCTCGGGCGAGGAC
TTGGCAGCTCTGGCACACTTAATGCTGCCCGCGGGCTCCGACCGGCGGCGCGGGAGCCTGCTGGCCTTCG
CCGAGGATGCGCCCCCGTTCCGCCCGCGCCGTCGCTCTGCCGAGAGCCTGTTGTCCCTGCAGCCCTCGTC
CCTAGACGGCGGCCCGCGTCACGCGCAGGACTCGCCTCCCGGCAGCCCGCGTCGCCGCCCCGGGCCTGGC
GCCCGCTCCGCCTCGGTCTCGCTACTGCCCGACGCCTTCGCGCTGACCGCCTTCGAGCGCGAGCCGCAGG
CTCTGCGTCGCGTGCCCGCCCCAGCACAACCCTTCCCCGCTGCCCGGGACAGCGCGGAGCCTGCTGAGGT
CCCAACGCCCCCTGGTGGCCGTACGCAACGCAGCCAGGGACGCCGGGCCGCGCGCACGCACGTGGGGCCC
CTGCAGAGCAGCCTGAGCGCATCTTGGGGCGAGCCAGGCGGCTTGCACGCGGCGGGCTGCGGCAGCATTA
GCAGCTTTCTGAGCTCGCCCTCCGAGTCCTCGGGCTACGTCACGCTGCACTCGGACTCGCTGGGCTCTGC
GTCCTAG

Translation (608 aa):
MSDERRLPSSAVGWLACGGLSLLANAWGILSVGAKQKKWKPLEFLLCTLAATHMLNVAVPIATYAVVQLR
RQRPDYEWNEGLCKVFVSTFYTLTLATCFSVTSISYHRMWMVRWPVNYRLSNAKKQAVHTVMGIWMVSFI
LSALPAVGWHDTSERFYTHGCRFIVAEIGLGFGVCFLLLVGGSVAMGMVCTAIALFQTLATQVGHRADRR
TFTVPTIVVEDAQGKRRSSIDGSEPARTSLQITGLVATIVVIYDCLMGFPVLVVSFSSLRADASAPWMAL
CVLWCSVTQALLLPLFLWTCDRYRADLKAVWEKCVALMANDEDSDNETSLEGSISPDMVLERSLDYSYGG
DFVALDRMAKYELSALEGGLPQLYPLRPLQEDRMQYLQVPPTRRFSHDDADVWAAVPLPTFLPRWSSGED
LAALAHLMLPAGSDRRRGSLLAFAEDAPPFRPRRRSAESLLSLQPSSLDGGPRHAQDSPPGSPRRRPGPG
ARSASVSLLPDAFALTAFEREPQALRRVPAPAQPFPAARDSAEPAEVPTPPGGRTQRSQGRRAARTHVGP
LQSSLSASWGEPGGLHAAGCGSISSFLSSPSESSGYVTLHSDSLGSAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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