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Report for CCDS89755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89755.1 Public Mus musculus 4 Zfp37 23 108 98 CCDS HistoryNCBI Gene:22696Re-query CCDS DB by CCDS ID:89755.1Re-query CCDS DB by GeneID:22696See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89755.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000222050.1 ENSMUSP00000152491.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000222050.1Link to Ensembl Protein Viewer:ENSMUSP00000152491.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000222050Re-query CCDS DB by Protein ID:ENSMUSP00000152491
Original member NCBI NM_009554.4 NP_033580.3 Updated not alive Link to Nucleotide Sequence:NM_009554.4Link to Protein Sequence:NP_033580.3Re-query CCDS DB by Nucleotide ID:NM_009554Re-query CCDS DB by Protein ID:NP_033580
Current member NCBI NM_009554.5 NP_033580.3 Accepted alive Link to Nucleotide Sequence:NM_009554.5Link to Protein Sequence:NP_033580.3Re-query CCDS DB by Nucleotide ID:NM_009554Re-query CCDS DB by Protein ID:NP_033580Link to BLAST:NP_033580.3

Chromosomal Locations for CCDS 89755.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62191164 62192689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62204519 62204650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62205024 62205105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62208329 62208361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGGCTACATCCGAGCCTGCGGAAAGCGATGCGGAATGGGAGCAGCTGGAACCTGTGCAGAGAGATGTGT
ACAAGGATACGAAGCTAGAGAACTGCAGCAATCCAGCCTCCATGGGAAATCAAGATCCCAAACAAGACAT
AGTCTCCGTGTTGGAAGAAGAAGAGCCATCATCGGGAAAGGGGAAAAAAGCCAGCCCAAGTAGTCTGAAA
AAAATAGCAAGGCCCAAGACAGCAGGAACAAGTGCAAAACTCCAACAAGATGATGAGCATAGGGAGGAAA
AGCAGAAGTCCCAAAGCAAACTTACTAAGGAAGTGACACTCAGGAAGAAAAGTTCCAACAGCAAGAAAAG
CAGTGAGTATGGTTTGTTGGAGAACAAAAGTCTCCACTCAAAACACACTCCTTCCGAGAAAAAACTGCTT
AAGTCCAGTTCCCGTGGGAAGAACTCGAATCAGAATTCAGACTCTCTGAAAAAGAAACCTGACACAGCTA
ATGACCACAGGAAATCACTCAGCCATTCTGCATCTGATGTGAACAAAGATGAAATTCCAACTAGAAAGAA
ATGCGACAAGTTACCCAACAATAAGTTGTCTGATAAAGGTGACAAAAACCAAACCAGCAAAAAATGTGAG
AAAGTATGCCGTCATAGTGCATCCCATACCAAGGAAGACAAAATTCAGACCGGGGAGAAACGGAAATCAC
ACTGCCGTACTCCATCTAAACCTGAAAAAGCCCCAGGTTCTGGGAAACCTTATGAATGTAACCACTGTGG
GAAGGTCCTCAGCCATAAACAGGGACTCCTTGACCATCAAAGAACTCACACTGGGGAGAAACCATATGAA
TGTAATGAATGTGGGATAGCTTTCAGCCAGAAGTCCCACCTTGTTGTACATCAGAGAACTCACACTGGGG
AAAAACCATACGAGTGTGAACAGTGTGGCAAAGCACACGGACATAAACATGCCCTCACTGACCATCTAAG
AATCCATACTGGAGAAAAGCCCTACAAATGTAATGAATGTGGCAAAACGTTTAGACACAGCTCAAACCTT
ATGCAACACCTAAGATCTCACACGGGTGAGAAGCCGTATGAATGTAAGGAATGTGGCAAATCCTTTAGAT
ATAATTCATCTCTTACTGAACATGTGAGAACACACACAGGTGAAATACCATACGAATGTAACGAATGTGG
CAAAGCTTTCAAGTATGGCTCATCCCTGACTAAACATATGCGGATTCATACAGGGGAGAAACCATTTGAA
TGTAATGAATGTGGGAAAACTTTTAGCAAAAAGTCACACCTAGTTATACATCAAAGAACTCATACAAAGG
AGAAACCTTATAAATGTGATGAGTGTGGGAAAGCCTTTGGACATAGCTCATCTCTTACCTACCATATGAG
AACTCATACAGGTGACTGCCCCTTTGAATGTAATCAATGTGGTAAGGCCTTTAAACAGATTGAAGGCCTT
ACCCAACACCAGAGAGTTCACACAGGGGAGAAACCCTATGAGTGTGTTGAATGTGGGAAAGCCTTTAGTC
AGAAGTCACACCTCATCGTACACCAGAGAACTCATACAGGGGAGAAACCCTTTGAATGTTATGAGTGTGG
AAAAGCCTTCAATGCAAAATCACAACTTGTTATTCATCAGAGATCCCACACTGGAGAGAAACCCTATGAA
TGTATTGAATGTGGTAAAGCCTTCAAGCAAAATGCCTCTCTTACCAAACATATGAAAATTCACTCAGAAG
AACAATCTGAGGAAGAAGATTAA

Translation (590 aa):
MATSEPAESDAEWEQLEPVQRDVYKDTKLENCSNPASMGNQDPKQDIVSVLEEEEPSSGKGKKASPSSLK
KIARPKTAGTSAKLQQDDEHREEKQKSQSKLTKEVTLRKKSSNSKKSSEYGLLENKSLHSKHTPSEKKLL
KSSSRGKNSNQNSDSLKKKPDTANDHRKSLSHSASDVNKDEIPTRKKCDKLPNNKLSDKGDKNQTSKKCE
KVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGSGKPYECNHCGKVLSHKQGLLDHQRTHTGEKPYE
CNECGIAFSQKSHLVVHQRTHTGEKPYECEQCGKAHGHKHALTDHLRIHTGEKPYKCNECGKTFRHSSNL
MQHLRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYGSSLTKHMRIHTGEKPFE
CNECGKTFSKKSHLVIHQRTHTKEKPYKCDECGKAFGHSSSLTYHMRTHTGDCPFECNQCGKAFKQIEGL
TQHQRVHTGEKPYECVECGKAFSQKSHLIVHQRTHTGEKPFECYECGKAFNAKSQLVIHQRSHTGEKPYE
CIECGKAFKQNASLTKHMKIHSEEQSEEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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