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Report for CCDS89572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89572.1 Public Mus musculus 2 Ergic3 23 108 98 CCDS HistoryNCBI Gene:66366Re-query CCDS DB by CCDS ID:89572.1Re-query CCDS DB by GeneID:66366See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89572.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088650.10 ENSMUSP00000086025.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088650.10Link to Ensembl Protein Viewer:ENSMUSP00000086025.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000088650Re-query CCDS DB by Protein ID:ENSMUSP00000086025
Original member Current member NCBI NM_001356413.1 NP_001343342.1 Accepted alive Link to Nucleotide Sequence:NM_001356413.1Link to Protein Sequence:NP_001343342.1Re-query CCDS DB by Nucleotide ID:NM_001356413Re-query CCDS DB by Protein ID:NP_001343342Link to BLAST:NP_001343342.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343342.1 394 Q9CQE7-2 394 100% 0 0

Chromosomal Locations for CCDS 89572.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 156008141 156008228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156008365 156008435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156008564 156008651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156008860 156008979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156010440 156010533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156011100 156011265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156011349 156011406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156015377 156015391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156015989 156016020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156016688 156016802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156016889 156016953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156017580 156017716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156017797 156017852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 156018071 156018150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCTAAGACTCTGGAGGACTTCCGGGTCAAGA
CCTGCGGGGGTGCCACGGTGACCATCGTCAGTGGCCTTCTCATGCTCCTGCTTTTCCTATCGGAGTTGCA
GTATTATCTCACTACGGAGGTGCATCCTGAGCTCTACGTGGACAAGTCTCGGGGGGATAAACTGAAGATC
AACATCGATGTTCTTTTCCCGCACATGCCTTGTGCCTACTTGAGCATCGATGCCATGGACGTGGCCGGGG
AGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTC
AGAGGCTGAACGGCACGAGCTTGGGAAAGTCGAGGTGACAGTGTTTGACCCCAACTCCTTGGACCCCAAT
CGCTGTGAGAGCTGCTACGGCGCTGAGTCAGAAGACATCAAGTGCTGTAACAGTTGTGAAGATGTGCGGG
AGGCCTATCGCCGTCGAGGCTGGGCCTTCAAGAACCCGGACACCATTGAGCAGTGTCGGCGAGAGGGCTT
CAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTGCCAGGTGTACGGCTTCTTGGAGGTCAACAAGGTG
GCTGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAACAGTCTCATGTGCATGTCCATGCTGTGGAGA
TTCATGACTTGCAGAGCTTTGGCCTTGACAATCCATCTGATTGCTTGCAGATCAACATGACACACTACAT
CAAGCACCTGTCATTCGGGGAGGACTATCCAGGAATCGTGAACCCCCTAGACCACACCAACGTGACTGCA
CCCCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACAGTGTACATGAAGGTGGACGGGG
AGGTGCTGAGGACTAACCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAATGGGCTCCTGGGTGACCA
GGGCCTGCCGGGGGTCTTTGTGCTGTATGAGCTCTCACCAATGATGGTGAAGCTGACGGAGAAACACAGG
TCCTTCACCCACTTTCTGACAGGTGTGTGCGCCATCATTGGGGGCATGTTTACAGTGGCCGGCCTCATTG
ACTCGCTCATCTACCACTCCGCTCGGGCCATCCAGAAGAAAATTGACCTAGGGAAGACAACGTAG

Translation (394 aa):
MEALGKLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRGDKLKI
NIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSSEAERHELGKVEVTVFDPNSLDPN
RCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKV
AGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLDNPSDCLQINMTHYIKHLSFGEDYPGIVNPLDHTNVTA
PQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHR
SFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGKTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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