NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS89260.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89260.1 Public Mus musculus 18 Wdr7 23 108 98 CCDS HistoryNCBI Gene:104082Re-query CCDS DB by CCDS ID:89260.1Re-query CCDS DB by GeneID:104082See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89260.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000236879.1 ENSMUSP00000158252.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000236879.1Link to Ensembl Protein Viewer:ENSMUSP00000158252.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000236879Re-query CCDS DB by Protein ID:ENSMUSP00000158252
Original member Current member NCBI NM_001360837.1 NP_001347766.1 Accepted alive Link to Nucleotide Sequence:NM_001360837.1Link to Protein Sequence:NP_001347766.1Re-query CCDS DB by Nucleotide ID:NM_001360837Re-query CCDS DB by Protein ID:NP_001347766Link to BLAST:NP_001347766.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347766.1 1457 Q920I9-2 1457 100% 0 0

Chromosomal Locations for CCDS 89260.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63720231 63720389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63720757 63720863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63724121 63724199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63727619 63727793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63728439 63728515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63730090 63730209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63735579 63735724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63736404 63736506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63738743 63738884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63739105 63739353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63740027 63740247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63755036 63755231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63760571 63760785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63777528 63778297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63779869 63779957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63794225 63794343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63796158 63796281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63825125 63825238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63865285 63865506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63904030 63904216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63924812 63924929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63926579 63926728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63927266 63927348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63935849 63935948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63979320 63979424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63987156 63987359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4374 nt):
ATGGCAGGAAACAGCCTAGTTCTGCCCATTGTTCTTTGGGGCCGCAAAGCACCCACACATTGCATTTCGT
CAATACTGTTGACAGATGATGGGGGCACAATTGTAACTGGATGCCACGATGGACAAATATGTCTCTGGGA
TGTTTCGGTAGAACTAGAAGTTAATCCCCGAGCACTGTTATTTGGCCACACAGCATCCATCACTTGTTTG
TCAAAAGCCTGCGCTTCTGGGGACAAGCGGTACACTGTGAGCGCGTCTGCAAACGGAGAGATGTGCCTCT
GGGATGTGAACGATGGCAGATGTATTGAATTTACCAAGTTAGCCTGCACACACACTGGCATACAGTTCTA
CCAGTTCTCTGTTGGGAACCAGCAAGAGGGCAGGCTCCTCTGCCATGGACATTACCCTGAAATCCTCGTT
GTGGATGCCACCAGCCTTGAGGTGTTGTATTCCTTGGTATCGAAGATCTCTCCAGACTGGATCAGCTCCA
TGAGCATCATCCGCTCTCAGCGGACACAAGAGGACACTGTGGTGGCGCTCTCTGTGACAGGTATTCTGAA
GGTGTGGATTGTCACCTCTGAAATGAGTGGAATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAA
CCAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCATTCACACAGAGGTCACTTTTGGTCGTAT
GCTCCAAATACTGGAGGGTGTTTGATGCTGGCGACTACTCTCTGTTGTGCTCAGGTCCTAGTGAAAATGG
ACAGACATGGACTGGAGGGGACTTTGTGTCTGCAGACAAAGTCATCATCTGGACAGAAAATGGGCAGAGT
TACATCTACAAACTCCCTGCCAGTTGCCTTCCAGCTAGTGATTCATTCCGCAGCGACGTGGGGAAAGCAG
TGGAAAATTTGATCCCTCCTGTGCAGCATAGCCTCTTGGATCAGAAAGATAAAGAGTTGGTAATTTGTCC
TCCTGTTACTCGGTTTTTCTACGGATGCAAGGAATATTTGCATAAGCTACTAATTCAGGGCGATTCTTCT
GGAAGGTTAAATATCTGGAACATAGCAGACATAGCAGAGAAACAGGAAGCCGATGAAGGGCTAAAGATGA
CAACTTGTATTAGCTTGCAAGAGGCATTTGACAAGCTGAAGCCTTGCCCTGCTGGAATTATCGATCAGCT
AAGTGTGATTCCCAACAGCAACGAACCTCTTAAAGTAACTGCGAGTGTCTACATACCAGCACACGGGCGA
CTTGTTTGTGGCCGGGAAGATGGAAGCATCATTATTGTGCCTGCCACCCAGACGGCCATAGTTCAGCTAT
TGCAAGGAGAACACATGCTCAGAAGAGGTTGGCCCCCTCACAGAACCCTCCGTGGCCATCGGAACAAAGT
CACGTGCCTGCTGTATCCCCATCAGGTCTCAGCTCGGTATGACCAAAGATACCTGATATCTGGAGGTGTG
GATTTTTCCGTCATAATTTGGGACATATTTTCTGGAGAAATGAAACATATCTTCTGTGTTCATGGTGGTG
AGATCACACAACTTCTGGTCCCCCCGGAAAACTGTAGTGCAAGAGTTCAACACTGCATCTGTTCCGTAGC
CAGTGACCACTCTGTAGGCCTCCTAAGTCTGCGAGAGAAAAAATGCATCATGTTGGCGTCTCGCCACCTC
TTTCCTATTCAGGTGATCAAGTGGAGGCCTTCCGACGACTACCTGGTGGTGGGATGCACAGACGGCTCTG
TGTATGTCTGGCAGATGGACACTGGTGCGCTGGATCGTTGTGCAATGGGAATCACAGCAGTGGAGATACT
GAACGCTTGTGACGAAGCCGTTCCTGCCGCTGTAGACTCTCTTAGTCATCCAGCAGTCAACCTGAAACAA
GCCATGACAAGACGGAGTCTCGCCGCCCTTAAAAATATGGCCCACCATAAGCTGCAAACCCTTGCAACGA
ACCTTTTGGCTTCTGAGGCCTCTGACAAGGGTAATTTACCTAAATATTCCCATAACTCCCTGATGGTTCA
AGCAATAAAGACAAACCTAACAGACCCGGATATCCATGTGCTTTTCTTTGATGTGGAAGCTTTGATTATT
CAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCACTTATTTCCCCAGAGAATCTGCAGAAAGCAT
CTGGCAGTTCAGACAAAGGGGGCTCTTTCCTAACTGGGAAGCGAGCAGCGGTTCTTTTCCAGCAAGTGAA
AGAAACTATCAAAGAGAACATAAAGGAACACCTTCTGGATGAGGAGGAGGACGAGGAGGAGGCGAGGAGG
CAGAGCAGGGAGGATAGTGACCCTGAGTACCGGGCCAGCAAGTCCAAGCCACTGACCCTACTAGAATACA
ACCTTACTATGGATACCGCAAAATTATTCATGTCCTGTCTCCACGCCTGGGGCTTGAATGAAGTTCTGGA
TGAAGTTTGTCTCGATCGCCTCGGAATGCTGAAACCGCACTGCACGGTGTCCTTTGGTCTCCTATCGAGA
GGAGGTCATATGTCGCTGATGCTTCCCGGTTATAATCAGGCTGCTGGAAAACTGCTGCATGCGAAAGCAG
AAGTAGGAAGGAAGCTGCCAGCAGCGGAGGGCGTAGGCAAGGGAACCTACACAGTGTCTCGAGCGGTCAC
CACTCAGCATCTGTTGTCCATCATATCCCTGGCGAATACTTTAATGAGTATGACCAATGCAACTTTCATT
GGCGATCACATGAAGAAGGGCCCCACCAGGCCGCCTAGACCTGGCACCCCAGACCTCTCTAAGGCGAGGG
ATTCCCCTCCACCCTCCAGTAACATTGTGCAAGGACAGATTAAACAAGGCTGGAGCCAGTTAGCCGCCAT
GCACTGTGTTATGTTGCCTGACCTGCTGGGGCTGGAGAGATTCAGGCCTCCTCTCCTGGAGATGCTAGCT
CGAAGATGGCAGGACCGATGCTTGGAGGTGAGAGAGGCTGCACAGGCCCTGCTTCTAGCTGAGCTGAGAA
GGATTGAGCAGGCAGGACGGAAGGAGACGATCGACACCTGGGCTCCTTACTTACCTCAGTATATGGACCA
TGTCATATCACCTGGCGTCACGGCGGAAGCCATGCAGACTATGGCAGCTGCTCCAGATGCCTCGGGCCCA
GAAGCCAAAGTCCAGGAAGAAGAGCATGACCTGGTGGATGATGACATCACTGCAGGTTGCTTGTCAAGTG
TCCCACAGATGAAAAAAATCTCCACGTCTTACGAAGAAAGAAGGAAGCAGGCCACGGCTATTGTTCTCCT
GGGAGTGATAGGGGCAGAGTTTGGAGCTGAAATTGAACCGCCGAAGCTGCTGACCAGGCCTCGAAGCTCC
AGTCAAATCCCTGAAGGCTTTGGCTTGACCAGCGGAGGCTCCAACTACTCCCTGGCCAGACACACGTGCA
AGGCACTGACATATCTTCTGCTACAGCCACCAAGTCCCAAGCTCCCTCCTCATAGCACCATCCGGAGAAC
TGCCACTGACCTGATTGGGCGAGGGTTCACTGTATGGGAGCCCTACATGGATGTGTCCGCTGTCCTGATG
GGGCTGCTGGAGCTCTGTGCAGACGCTGAGAAACAACTTGCCAACATCACAATGGGGCTGCCTCTGAGCC
CTGCAGCTGACTCTGCCCGCTCCGCAAGGCACGCCCTGTCTCTCATCGCCACAGCCAGACCACCCGCCTT
CATCACCACCATAGCTAAGGAGGTCCACAGACACACGGCCCTTGCAGCGAACACCCAGTCCCAGCAGAGT
ATACACACCACCACCCTGGCGAGGGCTAAAGGCGAAATCCTGAGAGTCATTGAAATTCTCATTGAAAAGA
TGCCCACGGATGTGGTGGATCTTCTTGTGGAGGTGATGGATATCATCATGTACTGCCTGGAAGGATCTTT
AGTGAAAAAGAAGGGTCTTCAGGAGTGTTTTCCAGCTATCTGCAGGTTCTACATGGTCAGCTATTATGAG
CGCAGTCACAGAATCGCAGTTGGAGCACGCCATGGCTCAGTAGCCCTGTATGACATCCGGACTGGAAAAT
GTCAGACAATCCATGGGCACAAGGGACCAATCACGGCGGTGTCCTTTGCTCCTGATGGCCGTTACCTTGC
CACCTACTCGAACACCGACAGCCACATTTCCTTCTGGCAGATGAACACCTCACTCCTGGGAAGCATTGGA
ATGCTGAACTCAGCTCCTCAGCTGCGCTGCATCAAGACCTACCAGGTCCCTCCAGTGCAGCCAGCATCCC
CTGGCTCCCACAACGCCCTTAAGTTGGCCCGGCTCATCTGGACTTCCAACCGGAATGTTATCCTCATGGC
CCATGATGGGAAGGAACACCGCTTCATGGTCTGA

Translation (1457 aa):
MAGNSLVLPIVLWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVELEVNPRALLFGHTASITCL
SKACASGDKRYTVSASANGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFSVGNQQEGRLLCHGHYPEILV
VDATSLEVLYSLVSKISPDWISSMSIIRSQRTQEDTVVALSVTGILKVWIVTSEMSGMQDTEPIFEEESK
PIYCQNCQSISFCAFTQRSLLVVCSKYWRVFDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQS
YIYKLPASCLPASDSFRSDVGKAVENLIPPVQHSLLDQKDKELVICPPVTRFFYGCKEYLHKLLIQGDSS
GRLNIWNIADIAEKQEADEGLKMTTCISLQEAFDKLKPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQRYLISGGV
DFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHL
FPIQVIKWRPSDDYLVVGCTDGSVYVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLKQ
AMTRRSLAALKNMAHHKLQTLATNLLASEASDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALII
QLLTEEASRPNTALISPENLQKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDEEEDEEEARR
QSREDSDPEYRASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAAGKLLHAKAEVGRKLPAAEGVGKGTYTVSRAVTTQHLLSIISLANTLMSMTNATFI
GDHMKKGPTRPPRPGTPDLSKARDSPPPSSNIVQGQIKQGWSQLAAMHCVMLPDLLGLERFRPPLLEMLA
RRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDTWAPYLPQYMDHVISPGVTAEAMQTMAAAPDASGP
EAKVQEEEHDLVDDDITAGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSS
SQIPEGFGLTSGGSNYSLARHTCKALTYLLLQPPSPKLPPHSTIRRTATDLIGRGFTVWEPYMDVSAVLM
GLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQS
IHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYE
RSHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIG
MLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH