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Report for CCDS89031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89031.1 Public Mus musculus 17 Uqcc2 23 108 98 CCDS HistoryNCBI Gene:67267Re-query CCDS DB by CCDS ID:89031.1Re-query CCDS DB by GeneID:67267See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89031.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119227.2 ENSMUSP00000113777.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119227.2Link to Ensembl Protein Viewer:ENSMUSP00000113777.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119227Re-query CCDS DB by Protein ID:ENSMUSP00000113777
Original member Current member NCBI NM_001364944.1 NP_001351873.1 Accepted alive Link to Nucleotide Sequence:NM_001364944.1Link to Protein Sequence:NP_001351873.1Re-query CCDS DB by Nucleotide ID:NM_001364944Re-query CCDS DB by Protein ID:NP_001351873Link to BLAST:NP_001351873.1

Chromosomal Locations for CCDS 89031.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 27122713 27122840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27125147 27125216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27125884 27125931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27133740 27133877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGGCCGCTCTCCGCTACCGGCGTTTCCTTAAGCTCTGTGAGGAATGGCCAGTGGACGAGACCAAACGGG
GCCGGGACTTGGGCGCTTACCTGCGGCAGCGGGTAGCGCAGGCCTTCCGGGAGGGAGAGAACACCCAGAT
GTACGAGAGCTTAGCACGACTGCATTCAAACTACTACAAGCACAAGTACCCTCGCCCCAGAGACACCAGC
TTCAGTGGCCTGTCCGTGGAAGAGTACAAGCTGATCCTGTCCACAGACACTTTGGAAGAGTTCCAAGAGA
TGAATAAGAGCATGTGGAAGAAACTGCAGGAGAAGTTTGCGCCCACCAGGCCTGAGGAGAAGCACAAGGC
CTGGACTCGGGTCCTGTCCCGCCCACGGACCTGA

Translation (127 aa):
MAALRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENTQMYESLARLHSNYYKHKYPRPRDTS
FSGLSVEEYKLILSTDTLEEFQEMNKSMWKKLQEKFAPTRPEEKHKAWTRVLSRPRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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