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Report for CCDS88641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88641.1 Public Mus musculus 14 Wdhd1 23 108 98 CCDS HistoryNCBI Gene:218973Re-query CCDS DB by CCDS ID:88641.1Re-query CCDS DB by GeneID:218973See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88641.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111792.8 ENSMUSP00000107422.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111792.8Link to Ensembl Protein Viewer:ENSMUSP00000107422.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111792Re-query CCDS DB by Protein ID:ENSMUSP00000107422
Original member Current member NCBI NM_172598.3 NP_766186.2 Accepted alive Link to Nucleotide Sequence:NM_172598.3Link to Protein Sequence:NP_766186.2Re-query CCDS DB by Nucleotide ID:NM_172598Re-query CCDS DB by Protein ID:NP_766186Link to BLAST:NP_766186.2

Chromosomal Locations for CCDS 88641.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 47241612 47241812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47243803 47243941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47244985 47245112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47245287 47245457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47245833 47245876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47247381 47247434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47247786 47247898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47247996 47248213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47250760 47250891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47251918 47252032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47256104 47256260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47258521 47258658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47261340 47261581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47263439 47263623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47265674 47265858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47266981 47267062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47268072 47268213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47268656 47268762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47270135 47270227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47272136 47272231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47272867 47272917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47273112 47273223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47273913 47274064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47274744 47274855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47276521 47276597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3246 nt):
ATGCCGGCCACACAGAAGCCCATGAGGTACGGACATACGGAAGGGCACACCGAAGTCTGCTTTGATGATT
CTGGAAGCTATATTGTGACTTGTGGCAGTGATGGTGATGTGAGGATGTGGGAAGACTTGGACGACGATGA
CCCTAAGTCCGTTAATGTTGGAGAAAAGGCATTTTCATGTGCTTTGAAGAATGGAAAATTGGTCACTGCA
GTTTCTAATAATACCGTCCAAGTCTATACATTCCCTGAAGGAGTTCCTGATGGCATATTAACACGCTTCA
CTACAAATGCAAACCATGTGGTCTTCAATGGGGCCGGCAACAAAATTGCTGCTGGGTCAAGTGATTTTCT
GGTCAAAGTTGTGGATGTGATGGATAACAGCCAGCAGCAAACATTTCGAGGACATGATGCCCCTGTTTTA
AGTCTGTCTTTTGATCCTAAGGATATCTTTCTGGCATCGGCTAGTTGTGATGGAACTGTCAGGGTATGGA
ATATATCTGATCAGACCTGTGCTGTCAGTTGGCCAGTACTGCAAAAGAGCAATGACGTGGTGAACGCCAA
GTCCATCTGCAGACTCGCGTGGCAGCCCAAGGCCGGGAAGTTACTAGCAGTTCCTGTGGAAAAATCTGTT
AAGCTGTACAGAAGAGAAACCTGGAGTAATCCATTCGATCTTTCAGATAGTTCCATCTCCCAGACACTCA
ATATAGTAACCTGGTCTCCCTGTGGGCAGTATTTGGCTGCAGGTGCTATTAATGGCTTAATTGTAGTTTG
GAATGTGGAAACCAAAGACTGCATGGAAAGGGTAAAACATGAGAAAGGTTATGCAATTTGTGGCCTGGCC
TGGCATCCCACTTGTAGTCGGATATGTTATACTGATGTGGAAGGAAACCTTGGAGTCCTGGAAAATGTTT
GTGACCTCAGTGGAAAGGTGTCGAGCAATAAGGGCATTATAAATGAGGATGACGATAATGATGACATCAT
GCTGGCTGCAGATCATGACTTGGGAGACGATGAAAACTCAGTTGATGTTACAATGCTAAAAGCTGATCTT
TCTCACAAAGAGGAAGGGGACGATGATCAGGCACGAAGTATTCACAACCTCCCCCTTATAAGACCCCAAA
GGCCATTTTATGATGGGCCCATGCCAACCCCACGACAAAAGCCCTTCCAGTCAAGTTCAACGCCCTTGCA
TCTCTCTCACAGATTCATGGTGTGGAACTCTGTTGGGATTATTCGCTGCTATAACGACGATCAAGACAGT
GCCATAGACGTGGAGTTCCATGACACCTCTATCCATCATGCAACACATCTATTAAATGCTTTCAATTACA
CAATGGGAACTCTTTCCCATGAAGCTATTTTGTTGGCATGTGAAAGTGCTGATGAATTAGCAAGCAAGCT
TCATTGCTTGCACTTCAGTTCTTGGGACTCAAGCAAAGAGTGGATGGTAGATATGCCCCAGAATGAGGAC
ATCGAAGCCATATGCCTCGGTCTAGGCTGGGCCGCTGCTGCTACCACTGCCTTGCTCCTTCGACTGTTCA
CTATTGGAGGTGTTCAGAAAGAAGTCTTCTGCCTTCCTGGACCTGTGGTATCCATGGCAGGACACGGAGA
ACAGCTTTGCATTGTTTATCATAGAGGTACAGGGTTTGATGGAGATCAGTGCCTTGGAGTTCAACTACTC
GAGCTGGGGCGGAAGAAAAACCAGGTTTTGCATGGTGACCCTCTTCCTCTCACACGGAAATCCTACCTCA
CATGGCTGGGCTTCTCTGCTGAAGGTACTCCCTGTTACGTGGATTCCGAAGGCTGTGTTCGAATGCTAAA
CAGAGGACTCGGGAATACATGGACTCCTGTATGCAACATAAGAGAGCACTGCAAAGGAAAATCTGACCAC
TACTGGGTGGTTGGTATCCATGAGAATCCCCAGCAGCTAAGGTGCATCCCTTGTAAAGGTTCTCGGTTTC
CTCCCACCCTTCCACGACCTGCTGTAGCTATATTATCTTTTAAGCTTCCTTACTGTCAGACTTCAACAGA
GAAAGGCCAAATGGAGGAACAATTTTGGCATTCGGTTCTGTTTCACAACTACCTTGATTACTTGGCTAAA
AATGGTTATGATTATGAGGAGAGCATTAAAAACCAGGCAGTAAAAGAGCAGCAGGAACTCTTAATGAAAA
TGCTTGCGCTGTCTTGTAAACTGGAACGAGAATTCCGCTGTGTGGAACTTGCTGATCTAATGACTCAAAA
TGCCGTGCATTTAGCCATTAAATATGCTTCTCGCTCTCGGAAATTAATATTGGCTCAGAAACTTAGTGAA
CTTGCTGCAGAAAAGGCAGCTGAATTGGCAGAAACCCAGTCAGAAGAAGAGAAAGAAGAGGATTTCAGAG
AAAAACTGAATGCTGGTTACAGTCACACCACTACAGAATGGAGTCGGCCACGGGTCAGAAGTCAAGTTGA
AGATGCTGAGGACAGAGAGGACACTGTTTCTGAAGAGAAACCAGAGTCACATAACCATGGGCAGAACTTA
TTCCAAAGTGCCAATTCCTCTGATACACCAGCTCTTAAATCAGGTGCAGTTTTCTCGAGCAGCCAAGGAT
GGGTAAACCCCTTCAAGGTAGTAGTCAGTTCCAAAGAGCCAGCCGTATCAGCGAATTCAACACGCTCAGC
TAACATTTTAGACAGCATGAACAAATCATCCAGGAAGTCCACTTCTCTTAATCGAATGGAAAACAATGAA
AAATCTCCAGTTATAAAGCCTCTCACTCCCAAGCCAAGGTCTAAGCAGGCATCTGCAGCATCCTATTTCC
AGAAAAGAACTCCACAGGCTGATAAGACTGAGGAAGTAAAAGAAAATCCTAAAAGCTCGTCCTCTGATGC
TCCAGCCGTGTGCCTTCAAAACTCGGAAAACCAAAGGCCAAAGACTGGGTTCCAGATGTGGCTGGAAGAA
AATAGAAGTCAAATTTTGTCCGACAACCCTGACATTTCAGATGAAACAGACATAATAAAAGAGGGGATGA
TACGATTTAGAGTATTGTCCGCTGAAGAAAGGAAGGCATGGACTAACAAAGCCAAGGGAGAAACTGCCAG
CGATGGAGCTGAAGCAAAGAAGCGAAAGCGTGTGGTCAGCGAGATCTGTGAGACAGAGAACCAGGAAGAA
ACAGTGAAGGAGAATCTAGATCTTTCTAAAAAGCAAAAGGCGTTAAATCTTCCTGCTAACCAGAAATTGT
CAGCGTTTGCATTTAAGCAGGAGTAA

Translation (1081 aa):
MPATQKPMRYGHTEGHTEVCFDDSGSYIVTCGSDGDVRMWEDLDDDDPKSVNVGEKAFSCALKNGKLVTA
VSNNTVQVYTFPEGVPDGILTRFTTNANHVVFNGAGNKIAAGSSDFLVKVVDVMDNSQQQTFRGHDAPVL
SLSFDPKDIFLASASCDGTVRVWNISDQTCAVSWPVLQKSNDVVNAKSICRLAWQPKAGKLLAVPVEKSV
KLYRRETWSNPFDLSDSSISQTLNIVTWSPCGQYLAAGAINGLIVVWNVETKDCMERVKHEKGYAICGLA
WHPTCSRICYTDVEGNLGVLENVCDLSGKVSSNKGIINEDDDNDDIMLAADHDLGDDENSVDVTMLKADL
SHKEEGDDDQARSIHNLPLIRPQRPFYDGPMPTPRQKPFQSSSTPLHLSHRFMVWNSVGIIRCYNDDQDS
AIDVEFHDTSIHHATHLLNAFNYTMGTLSHEAILLACESADELASKLHCLHFSSWDSSKEWMVDMPQNED
IEAICLGLGWAAAATTALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLL
ELGRKKNQVLHGDPLPLTRKSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHCKGKSDH
YWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQTSTEKGQMEEQFWHSVLFHNYLDYLAK
NGYDYEESIKNQAVKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVHLAIKYASRSRKLILAQKLSE
LAAEKAAELAETQSEEEKEEDFREKLNAGYSHTTTEWSRPRVRSQVEDAEDREDTVSEEKPESHNHGQNL
FQSANSSDTPALKSGAVFSSSQGWVNPFKVVVSSKEPAVSANSTRSANILDSMNKSSRKSTSLNRMENNE
KSPVIKPLTPKPRSKQASAASYFQKRTPQADKTEEVKENPKSSSSDAPAVCLQNSENQRPKTGFQMWLEE
NRSQILSDNPDISDETDIIKEGMIRFRVLSAEERKAWTNKAKGETASDGAEAKKRKRVVSEICETENQEE
TVKENLDLSKKQKALNLPANQKLSAFAFKQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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