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Report for CCDS88410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88410.1 Public Mus musculus 12 Nudt14 23 108 98 CCDS HistoryNCBI Gene:66174Re-query CCDS DB by CCDS ID:88410.1Re-query CCDS DB by GeneID:66174See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88410.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002881.4 ENSMUSP00000002881.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002881.4Link to Ensembl Protein Viewer:ENSMUSP00000002881.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000002881Re-query CCDS DB by Protein ID:ENSMUSP00000002881
Original member Current member NCBI NM_001316724.1 NP_001303653.1 Accepted alive Link to Nucleotide Sequence:NM_001316724.1Link to Protein Sequence:NP_001303653.1Re-query CCDS DB by Nucleotide ID:NM_001316724Re-query CCDS DB by Protein ID:NP_001303653Link to BLAST:NP_001303653.1

Chromosomal Locations for CCDS 88410.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 112934810 112935050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112938356 112938557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112938795 112938859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112939279 112939322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112941991 112942071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGGAGCGCATCGACGGGGTGGCCGTGGGCCTCTGTGCCCATTCGCCCTACCTGCGGCCTTTCACGCTGC
ACTACCGCCAGGACGGTGTCCAGAAGTCCTGGGACTTTATGAAGACACATGACAGTGTGACTATTCTCAT
GTTCAACTCTTCTCGGAGAAGCCTGGTGTTGGTGAAACAGTTCCGGCCAGGGTCCCTGACAGCTGTGAAC
CAGGACCAGCCCCAAGAACTTCAGCAAGCACTGCCTGGCTCAGCGGGAGTGATGGTGGAACTCTGTGCCG
GTATTGTGGACCAGCCTGGGCTCTCACTGGAAGAGGCAGCCTGCAAGGAGGCTTGGGAAGAGTGCGGCTA
TCGCCTGGTCCCCACCGATCTGCGCAGAGTTGCCACATACATGTCTGGAGTAGGACTGACTAGCTCCAGG
CAGACCATGTTCTACGCGGAGGTGACAGATGCCCAGCGAGGCGGGCCTGGTGGAGGGCTGGCCGAGGAGG
GAGAACTCATCGAAGTGATCCATCTGAATTTAGATGACGCCCAGGCCTTCGCAGACAACCCTGACATCCC
CAAGACTCTCGGGGTTATCTACGCTATCTCTTGGTTCTTTAGCCAGGTGGTTCCCCATTTGAGTCTCCAG
TGA

Translation (210 aa):
MERIDGVAVGLCAHSPYLRPFTLHYRQDGVQKSWDFMKTHDSVTILMFNSSRRSLVLVKQFRPGSLTAVN
QDQPQELQQALPGSAGVMVELCAGIVDQPGLSLEEAACKEAWEECGYRLVPTDLRRVATYMSGVGLTSSR
QTMFYAEVTDAQRGGPGGGLAEEGELIEVIHLNLDDAQAFADNPDIPKTLGVIYAISWFFSQVVPHLSLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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