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Report for CCDS87883.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87883.1 Public Mus musculus 1 Mroh3 23 108 98 CCDS HistoryNCBI Gene:76422Re-query CCDS DB by CCDS ID:87883.1Re-query CCDS DB by GeneID:76422See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87883.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000212798.1 ENSMUSP00000148632.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212798.1Link to Ensembl Protein Viewer:ENSMUSP00000148632.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212798Re-query CCDS DB by Protein ID:ENSMUSP00000148632
Original member NCBI NM_001329610.1 NP_001316539.1 Updated not alive Link to Nucleotide Sequence:NM_001329610.1Link to Protein Sequence:NP_001316539.1Re-query CCDS DB by Nucleotide ID:NM_001329610Re-query CCDS DB by Protein ID:NP_001316539
Current member NCBI NM_001329610.2 NP_001316539.1 Accepted alive Link to Nucleotide Sequence:NM_001329610.2Link to Protein Sequence:NP_001316539.1Re-query CCDS DB by Nucleotide ID:NM_001329610Re-query CCDS DB by Protein ID:NP_001316539Link to BLAST:NP_001316539.1

Chromosomal Locations for CCDS 87883.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 136181786 136181940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136182718 136182777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136183320 136183422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136184265 136184366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136185453 136185611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136185947 136186123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136186661 136186801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136190699 136190813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136190908 136191045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136191512 136191684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136192103 136192250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136196268 136196422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136198098 136198247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136199523 136199611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136200343 136200478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136200941 136201048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136206917 136207003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136207753 136207882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136208248 136208327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136208413 136208535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136208845 136208909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136211289 136211376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2682 nt):
ATGAATCTACACTCCGAGGAGAGAAATCTGAACAGAGTAACATTTCGGTCATCGATGTACGATGTCTTGT
TAGAGCCAAGTTTATCAGGATTGTGCCAGTCAGAGAAAGAAGCCTATCAGCTCATTCTGGATTTTATGGA
ACCAGGACAGATGTCCCAATTAGACAAGCTCAGTTTCCTGAATGCTGTGTCAACATTGAGCAGCGTTGTG
CGTGACCAGGCCAATGGCAACATGAATAAGTACTATCCAAAAACCCTTCTGGCTAAGAAAATTGAGACAT
TCATCCTGGAAGAACCCCCTGAGATCTTGGATAGTAGCGTGCGCCAGCAAGCCATGCTCTGCATCGTGGC
CCTGAGTCAGGTGAAGCCACCTTTCCACTTATGCCAGAAGCTGGATCTGGTCAATGTTAGCATCGCGAGC
ACATTCTCCCTGCCTCTCATCATGCCCAGTCTAGACCGAAAGGAGAGCGCTAGTCTCTACCTCCAGACGA
TTCAGGCCCTGGATGATATGCTCCAAGCTCTTGTGATGGAAGACATGAGCCCCAATATGGTTATACTGCA
AAGCTTTGTGGAGATCATCTTACCCTGGTTAATGCTGTCAGACAAAGTGTACGAGCAGATCCGAGCCCTG
GGCACTATTTCCCGATTGCTGAGGTTCATTTGTAATTTCTCTGAACTGTCAAACATGGCATCATTCTCCA
TAACTGGGAAACTGGTGGGCACCTTCAGCATCCTCTGCCTGAATCCCAGCCAAGACATCTCAATAGGCGC
ATTAGAGGCACTGAACTACCTGTTCATCATCCTCGTGCTTCAGAGAAGTAGCAGACAGAAGACAGAAGCC
ATCCTGAAGAACTTGCAGAAGCAATTCCGTGGAAACTTGACGGCCAACATGCAGAGTCTCACACTGTTCT
TCAGGAAATACCTGACCCCTGTGGAGAGAGCTGATGTGATTTTGGTGGCCTTGGAGTCCATGATCAACGG
CAGCCCGAATGACATCTCTGCAGCCTCCAAGATGTTAAAGATGGTCCTGAAGCACTCTGTTAAAGAAGTT
GCCAAGGTGTCAGAAATCATCAAGTTAATTTACTACCACATAGACAGAGCCACCGAGAAAGCTGCCCAGA
ATACCATAAAGAAGGTCTTCCAATTGCTGGTCCAGTCCCACACAGAGGAGGTTATCCTGACGCTGTTTAA
AGTAAAGGACCAATCACAAAGAGAGACACATAAATCCTGGGAAATCCTGGCTTCCTTTCCAAAAAGCTAC
CAAGCAATCATGGAGTATCTGCTGCAGAAGATAATTTCACCCCAGGCACCCGAGGACCAGGAGGAGGCTG
ACCATGAAACAGAGCTCTCAACACTGATTGCCACCAGGGCCATCCATGAGTTGCTGCTGGTACCAAGCCA
GCAGTTCGAGGTGCAGACCTTCTTCGCCTCCCTGTTCGTGGCACTGCTTTTCCAAATCTCTTCCCTGGTG
ACTAAAGGGAGCACCGTGGCCCAGGAGGCGCTGCCTGAAACTGAATCTGTGGATGTCGTGAGTTCTTCTG
TAGAGGCACTGAAGACCTTAATGCGCAGCTCTGGGTACATAAACCACATGTCTTATATTCAGACACTTGG
GGGCTGGGAACTGCTTGTCAGCCCTGAAAGCCATTATGAAGGTGTCACTCTGCTAGCCAGATCTCTGGTC
ATCAAGAACTGCTGGCACAATCGCCCTGTCTTCAGCTTCTTCATTAAGACCCTTCAGAACCCAAGCTGTA
CCAATTACCTCACAGCCCTGGTGTTCCTGACAGAGCTGCTCAACTGTCCAGATGTGGCAAGTGTTGTGGA
TGAAGTTGCCACGAAGATTCTGGCAAATTGGTTCAACTGTGATGAGTTAGTCACGGCGCATCTATTCCTG
AAGATCACAGAAGTCTTTGCAAAGCACAAAAACACGATGAAGCATCTCAACATCCTGCAGCCCTTCGTGC
TGAGCTGCTGCTACTCCTCCAGCAGTGACCTGGTGATGGAGACCTTCCTCCTGCTGCAGCGCATCCTCAA
GGACCTCACCTGGTATCAGTCCTCCTCCTTCATCATTAAGCTGACCTTCACTCTGGTCCACTTCTTTGAG
GAGGAGTCAGAGCAGCTGCGCCTGACAACCTTTGAGATGTATGAAAATGTCCTGGCTAAGGTCTCGAGGA
TGACCCTTGTCTTTCCCTTGAGGCACCAGGTCCTCAGCTTGCTAATGCTCCTTGTGTTTCACCTGAAGGA
TGTAAATGCCGCCGTGGTGGAGGTCTGTAGGCTCATCCTCTGCCGCATAGCTGTCATCCTGCACTGGTCC
AAACTCAAAGCGGTCTTTGCCAAGAATGATGTATTCACCATCCTCAGTGCCCTGTTGAAGCAGGAAAGGA
GCAGGGCACTCTGGTTTCTGAAGCAGACTGTGGCCCTCTTTAAGAGTCCACAGGGCCCCATCCGCCAAGT
TGCCGTGTGGTTTGCAGGTCAGATCATCTGGAACCTTCATAAGGCTGAGGAAGAGGAAATTGAAGAGGAA
TTAGCAGTCTTCAGGTATATGCAGAGAGACCCTGACCCCATAGTCAGCTGCCTCACCGTGCAGACTTTCT
ACATCCTAGAAGCCAAGGCGAAGATAATGCCAGCCGAGACCCCTTCCTCCTACCTCCTCTGCATGAGGAG
GATCAAAAGGAGATACTGCTGA

Translation (893 aa):
MNLHSEERNLNRVTFRSSMYDVLLEPSLSGLCQSEKEAYQLILDFMEPGQMSQLDKLSFLNAVSTLSSVV
RDQANGNMNKYYPKTLLAKKIETFILEEPPEILDSSVRQQAMLCIVALSQVKPPFHLCQKLDLVNVSIAS
TFSLPLIMPSLDRKESASLYLQTIQALDDMLQALVMEDMSPNMVILQSFVEIILPWLMLSDKVYEQIRAL
GTISRLLRFICNFSELSNMASFSITGKLVGTFSILCLNPSQDISIGALEALNYLFIILVLQRSSRQKTEA
ILKNLQKQFRGNLTANMQSLTLFFRKYLTPVERADVILVALESMINGSPNDISAASKMLKMVLKHSVKEV
AKVSEIIKLIYYHIDRATEKAAQNTIKKVFQLLVQSHTEEVILTLFKVKDQSQRETHKSWEILASFPKSY
QAIMEYLLQKIISPQAPEDQEEADHETELSTLIATRAIHELLLVPSQQFEVQTFFASLFVALLFQISSLV
TKGSTVAQEALPETESVDVVSSSVEALKTLMRSSGYINHMSYIQTLGGWELLVSPESHYEGVTLLARSLV
IKNCWHNRPVFSFFIKTLQNPSCTNYLTALVFLTELLNCPDVASVVDEVATKILANWFNCDELVTAHLFL
KITEVFAKHKNTMKHLNILQPFVLSCCYSSSSDLVMETFLLLQRILKDLTWYQSSSFIIKLTFTLVHFFE
EESEQLRLTTFEMYENVLAKVSRMTLVFPLRHQVLSLLMLLVFHLKDVNAAVVEVCRLILCRIAVILHWS
KLKAVFAKNDVFTILSALLKQERSRALWFLKQTVALFKSPQGPIRQVAVWFAGQIIWNLHKAEEEEIEEE
LAVFRYMQRDPDPIVSCLTVQTFYILEAKAKIMPAETPSSYLLCMRRIKRRYC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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