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Report for CCDS85569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85569.1 Public Mus musculus 8 Gab1 23 108 98 CCDS HistoryNCBI Gene:14388Re-query CCDS DB by CCDS ID:85569.1Re-query CCDS DB by GeneID:14388See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85569.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000210676.1 ENSMUSP00000147784.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210676.1Link to Ensembl Protein Viewer:ENSMUSP00000147784.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210676Re-query CCDS DB by Protein ID:ENSMUSP00000147784
Original member NCBI NM_001301298.1 NP_001288227.1 Updated not alive Link to Nucleotide Sequence:NM_001301298.1Link to Protein Sequence:NP_001288227.1Re-query CCDS DB by Nucleotide ID:NM_001301298Re-query CCDS DB by Protein ID:NP_001288227
Current member NCBI NM_001301298.2 NP_001288227.1 Accepted alive Link to Nucleotide Sequence:NM_001301298.2Link to Protein Sequence:NP_001288227.1Re-query CCDS DB by Nucleotide ID:NM_001301298Re-query CCDS DB by Protein ID:NP_001288227Link to BLAST:NP_001288227.1

Chromosomal Locations for CCDS 85569.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 80766329 80766487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80769651 80769773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80774550 80774673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80774934 80775027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80776161 80776250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80784627 80784930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80785101 80785186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80788490 80789094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80791389 80791614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80800101 80800395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 80879532 80879603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2178 nt):
ATGAGCGGCGGCGAAGTGGTTTGCTCGGGATGGCTCCGCAAGTCGCCCCCGGAGAAGAAGTTGAAGCGTT
ATGCGTGGAAGAGAAGGTGGTTTGTGTTGCGCAGTGGCCGTTTGACTGGAGACCCGGATGTCCTGGAGTA
TTACAAAAACGATCATGCCAAGAAGCCTATTCGGATTATTGATTTAAATTTATGTCAGCAAGTTGATGCT
GGGTTGACATTCAACAAAAAGGAGTTTGAAAACAGCTATATCTTTGATATCAACACCATCGACCGGATTT
TCTACTTGGTGGCAGATAGTGAGGAAGACATGAACAAGTGGGTCCGTTGTATCTGTGACATCTGTGGATT
CAATCCCACAGAAGAAGATCCTGTGAAGCCGCTGACTGGCTCCTCACAAGCACCCGTCGATTCACCTTTC
GCTATAAGTACAGCACCAGCCTCCAGTCAGATGGAAGCTTCTTCAGTCGCGCTACCTCCTCCTTACCAGG
TCATCAGCCTTCCGCCACACCCAGACACCCTCGGCCTCCAGGACGATCCACAAGACTACCTCTTGCTGAT
CAACTGTCAAAGCAAGAAGCCTGAACCTAACAGAACCCTCTTTGACTCTGCCAAGCCCACCTTTTCTGAG
ACAGACTGCAATGACAACGTCCCTTCCCACCAGACTCCTGCTTCCTCCCAGAGCAAACACGGAATGAATG
GCTTTTTCCAGCAACAAATGATGTATGACTGCCCACCGTCCCGGCTGACATCTGTCTCGGGAGAGTCCAG
CCTCTATAACCTGCCCAGGAGCTATTCCCATGACGTGTTGCCAAAGGAATCCCCATCAAGCACGGAGGCC
GACGGGGAGCTGTACACCTTTAACACCCCATCTGGGACTGCAGGTGTAGAAACGCAGATGAGACATGTAT
CCATCAGTTACGACATTCCGCCAACACCTGGCAACACTTACCAGATCCCACGGACATTTCCAGAAAGCAC
ACTGGGACAGTCATCAAAGCTGGACACCATTCCTGATATCCCCCCACCTCGGCCACCAAAGCCACATCCA
ACTCATGACCGGTCTCCTGTGGAAACGTGTGGAGTCCCACGCACGGCCTCGGACACTGACAGCAGTTACT
GTATCCCTCCTCCAGCAGGCATGACGCCCTCCCGGAGTAATACCATTTCCACCGTGGATTTGAACAAGTT
GCGGAAAGATGCTAGTTCTCAAGATTGCTATGATATTCCACGGACCTTTCCGAGCGATAGATCTAGTTCC
CTGGAAGGCTTCCATAGCCAGTATAAAATCAAAAGCGTGTTGACAGCGGGAGGTGTCTCGGGTGAAGAGC
TGGATGAGAACTACGTTCCCATGAACCCCAACTCGCCACCTCGACAACATTCCGGCAGCTTTACCGAGCC
AATCCAGGAGCCAAACTATGTGCCAATGACCCCAGGGACCTTTGACTTTTCTTCCTTTGGAATGCAAGTC
CCTCCTCCTGCTCATATGGGCTTCAGGTCCAGCCCAAAGACCCCTCCCAGGAGGCCAGTTCCTGTTGCTG
ACTGTGAACCACCCCCGGTGGATAGGAACCTCAAGCCAGACAGAAAAGGTCAGAGTCCTAAAATTTTAAG
ACCCAAACCCCATGGTTTAGAGCGAACTGATTCACAAACCATAGGTGACTTTGCTACAAGAAGAAAGGTC
AAGCCGGCACCTTTAGACATAAAACCTCTGTCAGAATGGGAAGAGCTGCAAGCCCCAGTCAGATCTCCCA
TCACCAGGAGCTTCGCTCGGGACTCCTCTAGGTTTCCCATGTCCCCTCGGCCTGATTCTGTGCACAGTAC
GACATCGAGCAGCGACTCTCATGACAGTGAAGAGAACTATGTCCCCATGAATCCAAATCTGTCTGGCGAA
GACCCGAATCTCTTTGCCAGCAACAGCCTTGATGGGGGAAGCAGCCCGATGAATAAACCCAAAGGAGACA
AACAAGTCGAATACCTGGATTTAGACCTAGATTCTGGGAAGTCCACGCCACCACGGAAGCAAAAGAGCAG
TGGTTCTGGCAGCAGCATGGCAGACGAGAGGGTGGATTACGTTGTGGTGGACCAACAGAAGACTCTGGCC
CTGAAGAGTACCAGAGAAGCTTGGACGGATGGGAGGCAGTCCACAGAGTCCGAGACACCCACCAAGAATG
TGAAGTGA

Translation (725 aa):
MSGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLCQQVDA
GLTFNKKEFENSYIFDINTIDRIFYLVADSEEDMNKWVRCICDICGFNPTEEDPVKPLTGSSQAPVDSPF
AISTAPASSQMEASSVALPPPYQVISLPPHPDTLGLQDDPQDYLLLINCQSKKPEPNRTLFDSAKPTFSE
TDCNDNVPSHQTPASSQSKHGMNGFFQQQMMYDCPPSRLTSVSGESSLYNLPRSYSHDVLPKESPSSTEA
DGELYTFNTPSGTAGVETQMRHVSISYDIPPTPGNTYQIPRTFPESTLGQSSKLDTIPDIPPPRPPKPHP
THDRSPVETCGVPRTASDTDSSYCIPPPAGMTPSRSNTISTVDLNKLRKDASSQDCYDIPRTFPSDRSSS
LEGFHSQYKIKSVLTAGGVSGEELDENYVPMNPNSPPRQHSGSFTEPIQEPNYVPMTPGTFDFSSFGMQV
PPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKGQSPKILRPKPHGLERTDSQTIGDFATRRKV
KPAPLDIKPLSEWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSGE
DPNLFASNSLDGGSSPMNKPKGDKQVEYLDLDLDSGKSTPPRKQKSSGSGSSMADERVDYVVVDQQKTLA
LKSTREAWTDGRQSTESETPTKNVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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