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Report for CCDS84675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84675.1 Public Mus musculus 3 Tet2 23 108 98 CCDS HistoryNCBI Gene:214133Re-query CCDS DB by CCDS ID:84675.1Re-query CCDS DB by GeneID:214133See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84675.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000196398.4 ENSMUSP00000143029.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000196398.4Link to Ensembl Protein Viewer:ENSMUSP00000143029.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000196398Re-query CCDS DB by Protein ID:ENSMUSP00000143029
Original member Current member NCBI NM_001346736.1 NP_001333665.1 Accepted alive Link to Nucleotide Sequence:NM_001346736.1Link to Protein Sequence:NP_001333665.1Re-query CCDS DB by Nucleotide ID:NM_001346736Re-query CCDS DB by Protein ID:NP_001333665Link to BLAST:NP_001333665.1

Chromosomal Locations for CCDS 84675.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 133466737 133468190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133469276 133469639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133471340 133471477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133473596 133473685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133476485 133476635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133479342 133479365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133480133 133480341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133481334 133481427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133483239 133483317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133485512 133488671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5763 nt):
ATGGAACAGGACAGAACCACCCATGCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTC
CCATCAGCCATACAGAACCTCTGGCTGTCAAACTCCAGAATGGAAGCCCGTTAGCAGAGAGACCTCATCC
AGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAAGGCAGC
CAGAGCAGTCATGAGAGTCCACATGAAGACAGAGGGTATTCCAGGTGCTTACAGAATGGAGGGATAAAAC
GCACAGTCAGTGAACCATCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAACTAGACCAAAAAGCTAA
GGGAGAAAGCAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTC
TCCGGACTAAGTGATAATGGAGAGCCCGTGACCTCGACCACCCAGGAAAGTTCAGGTGCAGATGCTTTCC
CAACACGGAACTACAATGGAGTTGAAATTCAGGTTCTCAACGAGCAGGAAGGGGAAAAAGGCAGGAGCGT
TACATTACTTAAAAACAAGATTGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCCATTCTGAGGAGAAC
ACACGTGGTGAACTCCTGGAAAAAACACAGTGTTATCCAGATTGTGTCTCCATTGCCGTGCAGAGTACCG
CATCTCATGTAAACACCCCTAGCAGTCAGGCTGCTATCGAGTTGTCCCACGAGATCCCTCAACCATCGCT
TACCTCAGCGCAGATCAATTTCTCCCAGACCTCAAGCTTGCAGCTGCCTCCAGAGCCAGCTGCAATGGTG
ACTAAGGCCTGTGATGCTGATAATGCCAGTAAACCAGCTATAGTACCAGGTACCTGTCCTTTTCAGAAAG
CAGAACACCAACAAAAGTCAGCTTTGGACATAGGCCCATCTCGTGCAGAAAACAAAACCATCCAAGGAAG
CATGGAGCTATTTGCTGAAGAATACTATCCTAGTTCCGACCGGAATTTGCAAGCTTCGCATGGCAGCTCT
GAACAGTATTCAAAGCAAAAGGAAACCAATGGTGCTTACTTCAGGCAAAGCTCGAAGTTCCCTAAAGATT
CCATCTCTCCCACTACTGTGACCCCACCGTCACAATCACTTCTTGCTCCCCGTCTTGTTCTTCAGCCTCC
TTTAGAAGGAAAAGGCGCTCTAAATGATGTAGCTTTGGAAGAACACCATGACTACCCCAACCGAAGCAAC
CGAACTCTTTTAAGGGAAGGGAAAATAGACCATCAACCCAAGACATCATCTAGCCAGAGTCTGAATCCAT
CTGTACATACACCCAACCCCCCCTTGATGCTTCCAGAACAGCATCAGAATGATTGTGGCTCACCGAGCCC
TGAAAAGTCAAGAAAAATGTCAGAATATCTCATGTATTACCTGCCAAATCATGGCCACAGTGGAGGTTTA
CAAGAACATAGCCAATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAAACAAA
CGCAAGGCTCTGTACAGGCAGCACCTGGCTGGATAGAACTGAAAGCCCCGAATTTGCATGAAGCACTCCA
TCAGACAAAACGCAAGGATATATCCTTGCACTCAGTCCTCCACTCTCAGACCGGCCCTGTCAATCAGATG
AGCTCCAAACAGTCCACTGGCAATGTCAACATGCCAGGAGGATTCCAAAGGCTACCTTACCTCCAGAAAA
CAGCCCAGCCAGAGCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAAGGACCGTCTCCAGGTATGGG
GGACCAACATCTTCAGTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAGGACAGATCCGTCATCTGAG
GCTCACCCGCAAGCACCGAGCGTTCCTCAGTATCATTTCCAGCAAAGAGTAAATCCCTCCAGTGATAAGC
ATTTGAGTCAACAGGCCACAGAGACTCAACGGTTATCAGGCTTTTTACAACATACTCCTCAGACGCAGGC
ATCACAAACACCAGCATCCCAGAACTCAAATTTCCCTCAAATCTGCCAGCAGCAGCAGCAGCAGCAGTTA
CAGAGGAAGAATAAAGAGCAAATGCCTCAGACTTTCTCTCATCTCCAAGGTAGCAATGATAAGCAAAGAG
AAGGCTCGTGCTTTGGCCAGATTAAAGTGGAAGAAAGCTTTTGTGTCGGAAATCAGTACTCCAAATCAAG
TAATTTCCAAACTCACAATAATACCCAAGGGGGGTTGGAGCAAGTACAAAATATAAATAAAAATTTTCCT
TATTCGAAGATCTTAACACCAAATTCGAGCAACTTACAGATTCTCCCTTCAAATGACACACACCCGGCTT
GTGAGCGGGAACAAGCTCTACATCCCGTAGGAAGTAAGACCTCAAACCTGCAGAACATGCAGTATTTCCC
GAATAATGTGACCCCAAATCAGGACGTTCACCGGTGCTTTCAGGAACAAGCGCAGAAGCCTCAGCAAGCT
TCGTCTCTACAGGGGCTTAAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAAC
AGAGGTATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACACAGAC
CCCTCCTCAGAAGGACACTCAGAAGCACGCTGCCTTAAGGTGGCTTCTCTTACAGAAGCAAGAACAGCAG
CAAACACAGCAATCCCAGCCTGGTCATAACCAGATGCTTAGGCCAATCAAGACTGAGCCTGTATCCAAAC
CTTCTTCCTATAGATACCCCTTGTCACCGCCACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGATCTC
CTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCTGAAGCAGTTT
CAGCTCAAGTCACTCTGTGACTATAAGGCTCTGACTCTCAAGTCACAGAAACACGTGAAAGTGCCAACAG
ATATCCAGGCTGCAGAATCGGAGAACCACGCCCGAGCTGCAGAGCCTCAAGCAACCAAAAGCACAGATTG
TTCTGTTCTCGACGATGTTTCAGAATCAGATACTCCTGGTGAACAAAGTCAGAATGGCAAATGTGAAGGA
TGCAATCCAGACAAAGATGAAGCTCCTTATTATACCCATCTAGGAGCTGGTCCTGATGTGGCAGCTATTA
GAACACTCATGGAAGAAAGGTATGGAGAGAAGGGTAAAGCTATTAGGATTGAAAAAGTCATATATACTGG
TAAAGAAGGCAAGAGCTCTCAGGGATGTCCTATTGCTAAATGGGTATATCGGAGATCGAGTGAGGAGGAG
AAACTACTGTGTTTGGTACGAGTGCGACCTAATCACACATGTGAGACGGCGGTGATGGTAATTGCCATCA
TGTTGTGGGACGGAATCCCAAAGCTACTCGCATCAGAACTCTACTCAGAACTTACAGATATCTTGGGCAA
GTGTGGCATATGCACCAACCGTCGCTGTTCTCAGAATGAAACGAAGAAAAAGCAATCACCACCCAGTAGA
AACTGTTGTTGTCAGGGTGAGAATCCAGAGACCTGTGGTGCCTCCTTTTCTTTTGGTTGTTCTTGGAGCA
TGTACTATAATGGATGTAAGTTTGCCAGAAGCAAGAAACCAAGGAAATTTAGGCTACATGGAGCTGAGCC
AAAAGAGGAAGAGAGACTAGGTTCTCATTTGCAAAACCTGGCTACTGTCATTGCTCCAATATACAAGAAG
CTTGCACCCGATGCATACAATAATCAGGTTGAATTTGAACACCAAGCCCCAGACTGCTGTTTGGGTCTGA
AGGAAGGCCGGCCATTCTCAGGAGTCACTGCATGTTTGGACTTCTCTGCTCATTCCCACAGAGACCAGCA
GAACATGCCAAATGGCAGTACAGTGGTGGTCACCCTCAATAGAGAAGACAATCGAGAAGTCGGAGCTAAG
CCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTACATCATCGCCCCTGAGGATGAGTTTGGGAGTACGG
AAGGCCAGGAGAAGAAGATACGGATGGGGTCCATTGAGGTTCTGCAGTCATTTCGGAGGAGAAGGGTCAT
AAGGATAGGAGAGCTGCCCAAGAGTTGCAAGAAGAAAGCGGAGCCCAAGAAAGCCAAGACCAAGAAAGCA
GCTCGAAAGCGTTCCTCTCTGGAGAACTGCTCCAGTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAA
AGCTGATGGAAAATGCAAGCCATATGAAACAAATGACAGCACAACCGCAGCTTTCGGGCCCGGTCATCCG
GCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCCACAGCAGCCGCAGCCACCTCAGCCG
CAGCCGCAGACGACACCTCAGCCACAGCCACAGCCACAGCATATCATGCCCGGTAACTCTCAGTCTGTTG
GTTCTCATTGTTCTGGATCCACCAGTGTCTACACGAGACAGCCTACTCCTCACAGTCCTTATCCCAGCTC
AGCACACACCTCAGATATTTATGGAGATACCAACCATGTGAACTTTTACCCCACTTCATCTCATGCCTCG
GGTTCATATTTGAATCCTTCTAATTACATGAACCCCTACCTTGGGCTTTTGAATCAGAATAACCAATATG
CACCTTTTCCATACAATGGGAGTGTGCCAGTGGACAATGGTTCCCCTTTCTTAGGTTCTTATTCCCCCCA
GGCTCAGTCCAGGGATCTACATAGATATCCAAACCAGGACCATCTCACCAATCAGAACTTACCACCCATC
CACACCCTTCACCAACAGACGTTTGGGGACAGTCCCTCTAAGTACTTAAGTTATGGAAACCAAAATATGC
AGAGAGATGCCTTCACTACTAACTCCACCCTAAAACCAAATGTACACCACCTAGCAACGTTTTCTCCTTA
CCCCACCCCCAAGATGGATAGTCATTTCATGGGAGCTGCCTCCAGATCACCATACAGCCACCCACACACT
GACTACAAAACCAGTGAGCATCATCTACCCTCTCACACGATCTACAGCTACACGGCAGCAGCTTCGGGGA
GCAGTTCCAGCCACGCCTTCCACAACAAGGAGAATGACAACATAGCCAATGGGCTCTCAAGAGTGCTTCC
AGGGTTTAATCATGATAGAACTGCTTCTGCCCAAGAACTATTATACAGTCTGACTGGCAGCAGTCAGGAG
AAGCAGCCTGAGGTGTCAGGCCAGGATGCAGCTGCTGTGCAGGAAATTGAGTATTGGTCAGATAGTGAGC
ACAACTTTCAGGATCCTTGCATTGGAGGGGTGGCTATAGCTCCAACTCATGGGTCAATTCTTATTGAGTG
TGCAAAGTGTGAGGTTCATGCCACAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCA
CTTGTACTGTATAGGCATAAGAATTTGTTTCTACCAAAACATTGTTTGGCTCTCTGGGAAGCCAAAATGG
CTGAAAAGGCCCGGAAAGAGGAAGAGTGCGGAAAGAATGGATCAGACCACGTGTCTCAGAAAAATCATGG
CAAACAGGAAAAGCGTGAGCCCACAGGGCCACAGGAACCCAGTTACCTGCGTTTCATCCAGTCTCTTGCT
GAGAACACAGGGTCTGTGACTACGGATTCTACCGTGACTACATCACCATATGCTTTCACTCAGGTCACAG
GGCCTTACAACACATTTGTATGA

Translation (1920 aa):
MEQDRTTHAEGTRLSPFLIAPPSPISHTEPLAVKLQNGSPLAERPHPEVNGDTKWQSSQSCYGISHMKGS
QSSHESPHEDRGYSRCLQNGGIKRTVSEPSLSGLHPNKILKLDQKAKGESNIFEESQERNHGKSSRQPNV
SGLSDNGEPVTSTTQESSGADAFPTRNYNGVEIQVLNEQEGEKGRSVTLLKNKIVLMPNGATVSAHSEEN
TRGELLEKTQCYPDCVSIAVQSTASHVNTPSSQAAIELSHEIPQPSLTSAQINFSQTSSLQLPPEPAAMV
TKACDADNASKPAIVPGTCPFQKAEHQQKSALDIGPSRAENKTIQGSMELFAEEYYPSSDRNLQASHGSS
EQYSKQKETNGAYFRQSSKFPKDSISPTTVTPPSQSLLAPRLVLQPPLEGKGALNDVALEEHHDYPNRSN
RTLLREGKIDHQPKTSSSQSLNPSVHTPNPPLMLPEQHQNDCGSPSPEKSRKMSEYLMYYLPNHGHSGGL
QEHSQYLMGHREQEIPKDANGKQTQGSVQAAPGWIELKAPNLHEALHQTKRKDISLHSVLHSQTGPVNQM
SSKQSTGNVNMPGGFQRLPYLQKTAQPEQKAQMYQVQVNQGPSPGMGDQHLQFQKALYQECIPRTDPSSE
AHPQAPSVPQYHFQQRVNPSSDKHLSQQATETQRLSGFLQHTPQTQASQTPASQNSNFPQICQQQQQQQL
QRKNKEQMPQTFSHLQGSNDKQREGSCFGQIKVEESFCVGNQYSKSSNFQTHNNTQGGLEQVQNINKNFP
YSKILTPNSSNLQILPSNDTHPACEREQALHPVGSKTSNLQNMQYFPNNVTPNQDVHRCFQEQAQKPQQA
SSLQGLKDRSQGESPAPPAEAAQQRYLVHNEAKALPVPEQGGSQTQTPPQKDTQKHAALRWLLLQKQEQQ
QTQQSQPGHNQMLRPIKTEPVSKPSSYRYPLSPPQENMSSRIKQEISSPSRDNGQPKSIIETMEQHLKQF
QLKSLCDYKALTLKSQKHVKVPTDIQAAESENHARAAEPQATKSTDCSVLDDVSESDTPGEQSQNGKCEG
CNPDKDEAPYYTHLGAGPDVAAIRTLMEERYGEKGKAIRIEKVIYTGKEGKSSQGCPIAKWVYRRSSEEE
KLLCLVRVRPNHTCETAVMVIAIMLWDGIPKLLASELYSELTDILGKCGICTNRRCSQNETKKKQSPPSR
NCCCQGENPETCGASFSFGCSWSMYYNGCKFARSKKPRKFRLHGAEPKEEERLGSHLQNLATVIAPIYKK
LAPDAYNNQVEFEHQAPDCCLGLKEGRPFSGVTACLDFSAHSHRDQQNMPNGSTVVVTLNREDNREVGAK
PEDEQFHVLPMYIIAPEDEFGSTEGQEKKIRMGSIEVLQSFRRRRVIRIGELPKSCKKKAEPKKAKTKKA
ARKRSSLENCSSRTEKGKSSSHTKLMENASHMKQMTAQPQLSGPVIRQPPTLQRHLQQGQRPQQPQPPQP
QPQTTPQPQPQPQHIMPGNSQSVGSHCSGSTSVYTRQPTPHSPYPSSAHTSDIYGDTNHVNFYPTSSHAS
GSYLNPSNYMNPYLGLLNQNNQYAPFPYNGSVPVDNGSPFLGSYSPQAQSRDLHRYPNQDHLTNQNLPPI
HTLHQQTFGDSPSKYLSYGNQNMQRDAFTTNSTLKPNVHHLATFSPYPTPKMDSHFMGAASRSPYSHPHT
DYKTSEHHLPSHTIYSYTAAASGSSSSHAFHNKENDNIANGLSRVLPGFNHDRTASAQELLYSLTGSSQE
KQPEVSGQDAAAVQEIEYWSDSEHNFQDPCIGGVAIAPTHGSILIECAKCEVHATTKVNDPDRNHPTRIS
LVLYRHKNLFLPKHCLALWEAKMAEKARKEEECGKNGSDHVSQKNHGKQEKREPTGPQEPSYLRFIQSLA
ENTGSVTTDSTVTTSPYAFTQVTGPYNTFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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