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Report for CCDS84456.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84456.1 Public Mus musculus 19 Ablim1 23 108 98 CCDS HistoryNCBI Gene:226251Re-query CCDS DB by CCDS ID:84456.1Re-query CCDS DB by GeneID:226251See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84456.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111529.7 ENSMUSP00000107154.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111529.7Link to Ensembl Protein Viewer:ENSMUSP00000107154.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111529Re-query CCDS DB by Protein ID:ENSMUSP00000107154
Original member Current member NCBI NM_001347459.1 NP_001334388.1 Accepted alive Link to Nucleotide Sequence:NM_001347459.1Link to Protein Sequence:NP_001334388.1Re-query CCDS DB by Nucleotide ID:NM_001347459Re-query CCDS DB by Protein ID:NP_001334388Link to BLAST:NP_001334388.1

Chromosomal Locations for CCDS 84456.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57037224 57037337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57039407 57039487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57040487 57040561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57041415 57041422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57041915 57041975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57042997 57043061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57043796 57043898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57044881 57044972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57046925 57047065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57049462 57049509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57061253 57061382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57063766 57063801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57068091 57068246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57068860 57068937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57079813 57079871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57083516 57083549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGTTCACAGAAGGGGAAGAAATGTATCTGCAAGGTTCTACCGTGTGGCATCCCGACTGTAAGCAGTCCA
CTAAGACAGAGGAGAAGCTGCGGCCCACCAGGACCTCCTCTGAAAGTATCTATTCTAGACCAGGCTCCAG
CATCCCTGGTTCACCAGGCCATACTATCTATGCAAAAGTAGACAATGAAATCCTGGATTACAAGGATTTA
GCAGCCATCCCCAAGGTCAAGGCGATCTATGACATCGAGCGTCCAGATCTCATTACCTATGAGCCTTTCT
ACACATCAGGCTATGAGGACAAGCAGGAGAGACAGAGCCTTGGAGAGTCTCCAAGGACTTTGTCTCCAAC
TCCATCTGCAGAAGGTTATCAAGATGTCCGGGATCGGATGATCCACAGGTCCACCAGCCAGGGCTCCATC
AACTCCCCTGTGTATAGCCGGCACAGTTACACTCCAACTACGTCTCGCTCGCCCCAGCACTTCCACCGAC
CTGATCAAGGGATCAACATTTACCGAAAACCACCCATCTACAAACAGCATGCTGCCTTGGCAGCCCAGAG
CAAGGCTTCAGAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCGCCAGATCCCAACGAGATA
CCAAAGATTGAGACGGACCACTGGCCGGGTCCCCCCTCACTTGCCGCCGTAGGAACTGACCCGAGGCGCA
GATCAAGTGGCAGAGAGGAAGATGAAGAGGAGCTTTTGAGACGCCGGCAGCTTCAAGAAGAACAGTTGAT
GAAGCTCAACTCAGGCCTGGGGCAGCTGATCCTGAAGGAAGAGATGGAGAAGGAGAGCAGAGAAAGAGCA
TCGCTGGCCAGTCGCTATGACTCTCCCCTCCACTCAGCTTCCCATGCTCCATCATCTAAAACTTCATCTC
TCCCTGGTTATGGAAAGAATGGCCTTCACCGGCCAGTTTCCACAGACTTCGCTCAGTACAACAGCTACGG
AGACATCAGTGGCGGAGTTCGAGACTACCAGACCCTCCCAGATGGCCACATGCCTGCAGTGAGAATGGAC
AGAGGAGTATCCATGCCCAACATGTTGGAACCAAAGATATTTCCATATGAGATGCTCATGGTGACCAACA
GAGGGCGCAACAAAATCCTGAGAGATGTGGATAGAACCCGGCTAGAGCGCCACTTAGCCCCAGAAGTATT
TTGGGAGATCTTTGGGATGTCCATACAGGAATTTGACAAGTTACCTCTTTGGAGACGCAACGACATGAAG
AAAAAAGCTAAACTCTTCTAA

Translation (426 aa):
MFTEGEEMYLQGSTVWHPDCKQSTKTEEKLRPTRTSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDL
AAIPKVKAIYDIERPDLITYEPFYTSGYEDKQERQSLGESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSI
NSPVYSRHSYTPTTSRSPQHFHRPDQGINIYRKPPIYKQHAALAAQSKASEDIIKFSKFPAAQAPDPNEI
PKIETDHWPGPPSLAAVGTDPRRRSSGREEDEEELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRERA
SLASRYDSPLHSASHAPSSKTSSLPGYGKNGLHRPVSTDFAQYNSYGDISGGVRDYQTLPDGHMPAVRMD
RGVSMPNMLEPKIFPYEMLMVTNRGRNKILRDVDRTRLERHLAPEVFWEIFGMSIQEFDKLPLWRRNDMK
KKAKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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