CCDS Report for Consensus CDS

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Report for CCDS84067.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
84067.1	Public	Mus musculus	13	Nnt	23	108	98

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84067.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000099149.9	ENSMUSP00000096753.3	Accepted	alive
EBI	ENSMUST00000223268.1	ENSMUSP00000152868.1	Accepted	alive
NCBI	NM_001308506.1	NP_001295435.1	Accepted	alive

Chromosomal Locations for CCDS 84067.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)

Genome Browser links:

Chromosome	Start	Stop
13	119336257	119336406
13	119338376	119338491
13	119339827	119339945
13	119354659	119354740
13	119357503	119357662
13	119366327	119366506
13	119368476	119368636
13	119369912	119370145
13	119372396	119372591
13	119374629	119374774
13	119381676	119381863
13	119386579	119386667
13	119389194	119389281
13	119394611	119394828
13	119396747	119396976
13	119404552	119404702

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2508 nt):
ATGGCGCACCTACTGAAGACGGTGGTGGCTGGCTGTTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTA AGGTTCTACCTGGGAAGAGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCC GGTAAAGCCAGGAATTCCATATAAGCAGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAAACGAGAAG CGAGTTGCATTGTCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAG GCGCAGGCGAAGCTTCCAAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAA GGAAGTTCTGGCTTCTGATCTGGTGGTCAAAGTGAGGGCCCCCATGGTGAACCCGACGTTAGGCGCTCAC GAAGCTGACTTTTTAAAGCCATCAGGAACTCTAATTAGCTTCATCTACCCAGCCCAAAATCCAGACTTGC TCAATAAACTTTCTGAAAGAAAAACCACAGTTCTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTCA GGGCTATGATGCTCTCAGTTCCATGGCCAACATCTCTGGTTATAAGGCTGTTGTTTTAGCAGCGAATCAT TTTGGGAGGTTTTTCACTGGGCAGATCACAGCTGCTGGAAAAGTTCCCCCTGCGAAGATCCTGATAGTTG GTGGTGGCGTTGCTGGGCTCGCTTCTGCGGGGGCAGCAAAGTCGATGGGCGCAGTTGTCCGAGGATTTGA TACAAGAGCTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTGAACCCTTGGAGGTTGACTTGAAGGAA TCTGGTGAGGGCCAAGGAGGATACGCGAAAGAGATGTCCAAAGAGTTCATTGAAGCTGAAATGAAGCTCT TTGCTCAACAGTGCAAGGAGGTGGACATCCTTATCAGCACAGCTCTGATTCCAGGTGGTTTTCTGGTGAC TCAGAGAATGCTGGACATGTTCAAGCGACCCACGGACCCTCCAGAGTATAATTATCTGTATCTGCTCCCT GGTGGCACCTTCGTAGGTGGATATTTAGCTGCTCTCTACGGTGGCTATAACATCGAAGAAATCATGTACC TGGGCTCAGGCTTGTGCTGTGTTGGGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACTCGGCAA TGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGAAGCCGGACCCGCAG CTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCC AGATTTCCGACTTGCCTCAGTTGGTCGCTGCTTTCCACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTG CATGGCCGAGTACATCGTAGAGTATCCACATTTTGCAATGGATGCCACGTCAAATTTCACCAAGATTGTG GCTTACCTTGGCACTTACATCGGCGGAGTCACCTTTAGTGGGTCTCTTGTTGCCTACGGAAAATTACAGG GTATTTTGAAATCAGCTCCTCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGCTGCTAG CGTGGGTGGGATAATCCCATTTATGGCTGACCCTAGCTTTACCACGGGCATCACCTGTCTGGGCTCTGTG TCCGCACTCTCTACTCTCATGGGTGTGACTTTGACGGCTGCTATTGGTGGTGCTGACATGCCTGTCGTCA TCACCGTGCTAAACAGCTACTCGGGCTGGGCTCTGTGTGCCGAGGGCTTCCTGCTCAACAACAACCTGCT GACCATCGTGGGCGCGCTCATCGGCTCCTCTGGTGCAATCCTGTCGTACATCATGTGTGTGGCCATGAAC CGCTCCCTGGCTAATGTCATTCTTGGAGGCTATGGCACAACGTCAACAGCTGGTGGAAAACCCATGGAAA TTTCTGGCACACATACAGAAATCAACCTGGACAACGCAGTTGAGATGATCCGGGAAGCTAACAGCATTGT TATTACTCCAGGGTATGGGCTCTGTGCTGCTAAAGCTCAGTACCCCATTGCCGATTTGGTGAAGATGCTT ACTGAACAAGGCAAAAAAGTCAGGTTTGGAATCCACCCAGTTGCGGGCCGAATGCCTGGTCAGCTTAATG TGCTCCTGGCCGAGGCGGGAGTGCCCTATGATATTGTGTTAGAAATGGATGAGATCAACAGTGATTTTCC AGACACCGACTTGGTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGCTCAAGAAGACCCCAAT TCTATAATTGCAGGCATGCCGGTCCTTGAGGTCTGGAAGTCCAAACAGGTCATTGTCATGAAGAGGTCCC TTGGCGTTGGCTACGCTGCCGTGGACAATCCGATCTTCTACAAACCTAACACAGCTATGCTTCTGGGGGA CGCCAAGAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGAATCCTATCAGAAGTGA
Translation (835 aa):
MAHLLKTVVAGCSCPFLSNLGSSKVLPGKRDFVRTLRTHQALWCKSPVKPGIPYKQLTVGVPKEIFQNEK RVALSPAGVQALVKQGFNVVVESGAGEASKFPDDLYRAAGAQIQGMKEVLASDLVVKVRAPMVNPTLGAH EADFLKPSGTLISFIYPAQNPDLLNKLSERKTTVLAMDQVPRVTIAQGYDALSSMANISGYKAVVLAANH FGRFFTGQITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAVVRGFDTRAAALEQFKSLGAEPLEVDLKE SGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGGFLVTQRMLDMFKRPTDPPEYNYLYLLP GGTFVGGYLAALYGGYNIEEIMYLGSGLCCVGALGGLSTQGTARLGNALGMIGVAGGLAATLGGLKPDPQ LLAQMSGAMAMGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCMAEYIVEYPHFAMDATSNFTKIV AYLGTYIGGVTFSGSLVAYGKLQGILKSAPLLLPGRHALNAGLLAASVGGIIPFMADPSFTTGITCLGSV SALSTLMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMN RSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAVEMIREANSIVITPGYGLCAAKAQYPIADLVKML TEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINSDFPDTDLVLVIGANDTVNSAAQEDPN SIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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