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Report for CCDS83700.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83700.1 Public Mus musculus 10 Anapc16 23 108 98 CCDS HistoryNCBI Gene:52717Re-query CCDS DB by CCDS ID:83700.1Re-query CCDS DB by GeneID:52717See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83700.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020307.10 ENSMUSP00000020307.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020307.10Link to Ensembl Protein Viewer:ENSMUSP00000020307.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000020307Re-query CCDS DB by Protein ID:ENSMUSP00000020307
Original member Current member EBI ENSMUST00000182152.1 ENSMUSP00000138579.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182152.1Link to Ensembl Protein Viewer:ENSMUSP00000138579.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182152Re-query CCDS DB by Protein ID:ENSMUSP00000138579
Original member NCBI NM_001347451.1 NP_001334380.1 Updated not alive Link to Nucleotide Sequence:NM_001347451.1Link to Protein Sequence:NP_001334380.1Re-query CCDS DB by Nucleotide ID:NM_001347451Re-query CCDS DB by Protein ID:NP_001334380
Current member NCBI NM_001347451.2 NP_001334380.1 Accepted alive Link to Nucleotide Sequence:NM_001347451.2Link to Protein Sequence:NP_001334380.1Re-query CCDS DB by Nucleotide ID:NM_001347451Re-query CCDS DB by Protein ID:NP_001334380Link to BLAST:NP_001334380.1

Chromosomal Locations for CCDS 83700.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 59988723 59988838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59990833 59990907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 59996448 59996614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 60002418 60002449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGAGTGCGAGGTCGTCCCTGTCGTACACAAATGAAGAGAGACTTCTACTGGAGGGAATGGCCGCCTCCT
CGTCTTCGTCTTCAGCTGGTGGGGTCAGTGGAAGCTCTGTCACCGGATCTGGTTTCAGTGTGTCCGACCT
TGCCCCACCTCGGAAAGCTCTGTTCACCTACCCGAAAGGAGCTGGAGAGATGTTAGAAGATGGCTCCGAG
CGATTCCTCTGTGAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAGCATGATCAGC
AAGTCGCTCGGATGGAAAAACTGGCTGGTCTGGTGGAAGAGCTGGAGGCCGACGAGTGGCGGTTTAAACC
CATCGAGCAGCTGCTGGGGTTCACACCCTCCTCGGGCTGA

Translation (129 aa):
MSARSSLSYTNEERLLLEGMAASSSSSSAGGVSGSSVTGSGFSVSDLAPPRKALFTYPKGAGEMLEDGSE
RFLCESVFSYQVASTLKQVKHDQQVARMEKLAGLVEELEADEWRFKPIEQLLGFTPSSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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