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Report for CCDS83597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83597.1 Public Mus musculus 1 Camsap2 23 108 98 CCDS HistoryNCBI Gene:67886Re-query CCDS DB by CCDS ID:83597.1Re-query CCDS DB by GeneID:67886See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83597.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000192001.5 ENSMUSP00000142166.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000192001.5Link to Ensembl Protein Viewer:ENSMUSP00000142166.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000192001Re-query CCDS DB by Protein ID:ENSMUSP00000142166
Original member Current member NCBI NM_001347110.1 NP_001334039.1 Accepted alive Link to Nucleotide Sequence:NM_001347110.1Link to Protein Sequence:NP_001334039.1Re-query CCDS DB by Nucleotide ID:NM_001347110Re-query CCDS DB by Protein ID:NP_001334039Link to BLAST:NP_001334039.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334039.1 1461 Q8C1B1-1 1461 100% 0 0

Chromosomal Locations for CCDS 83597.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 136270842 136271147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136271531 136271649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136273750 136273865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136274801 136274873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136276538 136276758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136277194 136277330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136280306 136282499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136282812 136282881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136283867 136283901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136285909 136286002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136287900 136287993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136292880 136293019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136293280 136293421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136297742 136297825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136304295 136304456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136324737 136324996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136345299 136345437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4386 nt):
ATGGGGGATGCTGCAGACCCGCGGGAGATGAGAAGGACGTTCATTGTTCCAGCCATCAAACCCTTTGACC
ACTATGACTTCTCCAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAGA
AAATGTGCCCGAGGAGCTTGGCGACCCATTTTACACAGACCAGTATGACCAGGAGCACATCAAACCCCCT
GTCGTTAACCTGCTTCTGTCGGCCGAGCTGTACTGTCGCGCTGGAAGCCTCATCCTCAAGAGCGATGCTG
CAAAGCCCCTCCTGGGCCATGATGCTGTGATCCAGGCATTAGCACAGAAAGGCCTGTATGTCACTGACCA
GGAGAAACTGGTAACTGAAAGAGATCTCCACAAGAAACCCATACAGATGAGTGCACATTTGGCTATGATT
GATACTCTAATGATGGCTTACACTGTAGAGATGATCAGCATAGAAAAAGTAATTGCATGTGCTCAACAGT
ATTCAGCTTTTTTTCAAGCCACAGATCTGCCCTATGATATTGAGGATGCTGTCATGTACTGGATGAATAA
GGTAAATGAACACTTGAAAGACATAATGGAACAAGAACAAAAATCTAAAGAGCACCACCCAGCTGAAGCT
CCAGGAGGCCAAAAGGCTCGTTACAGGAAGGAACAAACACTGCTTAAGCAACTGCCTTGCATTCCATTGG
TGGAAAACTTGTTGAAGGATGGGACCGACGGCTGCGCACTAGCTGCCCTCATTCACTTCTACTGCCCTGC
TGTTGTCCGGCTAGAGGATATTTGTTTGAAAGAAACTATGTCTTTGGCTGACAGTCTGTACAATCTACAG
CTGATTCAGGAATTTTGCCAAGAATACTTAAACCATTGCTGCCATTTCAGCTTGGAAGATATGCTTTATG
CTGCTTCATCCATAAAGAGTAATTATTTGGTGTTCATGGCAGAACTCTTCTGGTGGTTTGAAGTTGTGAA
GCCTTCATTTGTGCAGCCTCGTGTTGTCCGTCCACAAGGAGCTGAGCCTGCAAAAGACGTGCCATCGGTT
CCTGTCTTAAATGCTGCCAAAAGAAACATCCGGGATAGTTCATCTAGTTCTGACTTCTCCTCCAGATATA
CACGGCCGCAGACTCATTCTTCAGCCTCAGGAGGAATTAGAAGGTCTTCATCTATGTCTTATGTTGATGG
CTTCATAGGAACGTGGCCTAAAGAGAAAAGAACATCAGTGCATGGCGTTTCATTCGACATTTCTTTTGAT
AAAGAAGACAGTGCGCAGAGCTCCACTCCAAACCGGGGAATCATCCGCTCTGTTAGCAATGAAGGGCTCA
CTCTCAACAACAGCCGTGCATCCAAGCACATTAGGAAAAATCTGTCCTTCAAGCCAGTGAACGGAGAAGA
GGAGGAGAGCATTGAGGAAGAGCTTCATGTCGACCCTCATGGTGACCTCCAATCACCCATGCCTCTCAAC
ACGAATGAACTGAACTCTAATGAGAGTACTCACTACAAGCTTCCAAATGGGGCTTTACAAAACAGAGTGC
TTCTAGACGAGTTCGGGAATCAGATAGAAACGCCAAGCATTGAAGAAGCGTTACAGATAATCCACGATAC
TGAAAGACCTCCTCATACGCCACGGCCAGATCAGATCGCTAATGGCTTCTTTCTTCATGGTCAAGATCTA
AGTATCCTGAATTCAAATATCAAGCTAAACCAGTCCAGTCCTGATAACTTAACTGACACAAAAGGTGCCT
TGAGTCCCATAACAGACACTACAGAAGTCGACACTGGAATTCACGTTCCTTCAGAAGACATTCCGGAGAC
CATGGACGAAGACTCCTCCTTGAGAGATTATACTGTTAGCTTAGACTCCGACATGGATGATGCATCTAAG
CTTCTTCAGGACTATGACCTAAGAGCCAGCAACCCCAGGGAAGCCCTGAGTCCTTGCCCAAGCACCATCA
GCACCAAGTCTCAGCCCGGGAGCAGTGCCTCGTCTAGCTCTGGGGTGAAGATGACCAGCTTTGCTGAGCA
GAAGTTCAGGAAGCTGAATCACACTGATGGGAAAAGTAGCGGGAGCAGTTCACAGAAAACCACACCAGAA
GGCTCAGAACTGAATATTCCTCACGTGGTGTCTTGGGCTCAAATTCCAGAGGAAGCGGGTGTTGCCCCAG
GTCGGGACACGACACAGCTGTTGGCTTCTGAGATGGTGCACCTTAGGATGAGGCTGGAGGAAAAGAGACG
TGCGATAGAAGCCCAGAAGAAGAAGATGGAAGCCGCTTTTACCAAACAGAGGCAGAAAATGGGAAGGACA
GCGTTCCTGACTGTAGTGAAGAAGAAAGGGGAAGGGATTTCCCCTCTCCGAGAGGAAGCAGCAGGTGCAG
AAGACGAGAAAGTATATACGGACCGAGCAAAGGAAAGGGAGTCACAGAAAATGGACGGACAGAGGAGCAA
GTCCTTGGCAGACATAAAAGAGAGCATGGAGACCCCTCCAGGCAGATGGCTGAAGTCGCCAACCACGCCT
GTTGATCCTGAGAGGCAGTGGAACCTGACAAGCCCTTCAGAAGAGACTTTAAATGAAGGAGAAATCTTAG
AGTATACAAAGTCGATTGAAAAGCTGAATTCATCCTTGCACTTTCTACAACAAGAAATGCAGCGCTTGTC
CCTTCAGCAGGAGATGTTAATGCAGATGAGAGAGCAGCAGGCCTGGGTGATTTCACCTCCGCAACCCTCT
CCACAGAAGCAGATCCGCGATTTTAAACCTAGACAGGCAGGCCTGTCATCAGCTGCTGCACCGTTCTCTT
CAGACTCCCCACGCCCAACTCACCCATCCCCACAGTCTTCCACCAGGAAGAGCGCGTCTTTTTCTGTTAA
AAATCAAAGGACTCCAAGGCCAAATGAATTAAAAATAACTCCTTTGAACCGAACCTTGACACCTCCTCGG
TCTGTGGATAGCCTTCCTCGGCTAAGGAGGTTTTCCCCAAGTCAGGTTCCCATTCAGACACGGTCATTTG
TATGCTTTGGTGATGATGGAGAGCCCCAAAAAGAGCCCAAACAGAAAGAGGAGATTAAAAAGGAGCCCTC
AGAGTGCAAAGGGACTTTGGGACCTTGTGACCATAATCCTGGGGAGAAGGAGATTAAACCTGTTGAATCA
ACAGTGTCTGAGGTGTTGTCACAGCCTATCACAGAGACTGTGTGTGTGACACCAAATGAGGACCAACTGA
GCCAGCCCACAGAGCCACCTCCTAAACCTGTTTTCCCACCTACTGCTCCTAAAAATGTCAATCTGATTGA
AGTTTCTCTGTCCGATTTAAAACCCCCTGAAAAGGCTGATGTATCTGTTGAGAAGTTGGATGGAGAGAGT
GATAAGGAACAGTTTGACGATGACCAGAAAGTATGCTGTGGCTTCTTCTTTAAGGATGATCAAAAGGCAG
AGAATGATATGGCAATGAAGCGAGCAGCTTTGCTGGAGAAACGGCTAAGAAGAGAGAAAGAGACTCAGCT
TCGGAAGCAGCAACTGGAAGCGGAGATGGAGCATAAGAAAGAGGAGACGAGACGAAAAACTGAAGAAGAA
CGTCAGAAGAAGGAAGACGAGCGAGCACGGAGAGAGTTTATCAGGCAGGAATACATGAGGAGGAAACAGC
TGAAACTGATGGAAGACATGGATACAGTAATCAAGCCTCGACCTCAGGCGGCTAAACAGAAAAAACAGCG
GCCAAAATCCATTCACAGAGATCATATTGAATCTCCCAAAACACCGATCAAAGGCCCTCCAGTCTCTAGC
CTCTCATTGGCATCGCTGAACACAGGTGATAGCGAGAGTGTTCATTCGGGCAAGAGGACGCCAAGGTCGG
AGTCTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGGCAGTCGGAATGGCGAGAAAGACTGGGAAAACGC
ATCCACAACTTCTTCGGTGGCTTCTGGAACAGAGTACACAGGACCAAAGCTTTACAAGGAACCTAGTGCA
AAATCCAATAAACACATAATACAGAATGCTTTAGCTCATTGCTGTCTGGCTGGAAAAGTAAATGAAGGTC
AGAAGAAAAAAATCCTAGAGGAAATGGAGAAGTCAGATGCCAACAACTTCTTAATCTTGTTCCGGGATTC
AGGCTGCCAGTTCAGGTCTTTGTATACTTACTGCCCAGAAACTGAAGAAATCAATAAACTGACTGGGATA
GGTCCTAAATCTATCACTAAAAAGATGATTGAGGGACTTTACAAGTACAATTCTGACAGAAAACAGTTTA
GCCACATACCTGCTAAAACTTTATCTGCTAGCGTGGATGCGATTACCATTCATAGCCACTTATGGCAGAC
CAAGAGACCAGTAACCCCAAAAAAACTCTTACCCACTAAAGCATAG

Translation (1461 aa):
MGDAADPREMRRTFIVPAIKPFDHYDFSRAKIACNLAWLVAKAFGTENVPEELGDPFYTDQYDQEHIKPP
VVNLLLSAELYCRAGSLILKSDAAKPLLGHDAVIQALAQKGLYVTDQEKLVTERDLHKKPIQMSAHLAMI
DTLMMAYTVEMISIEKVIACAQQYSAFFQATDLPYDIEDAVMYWMNKVNEHLKDIMEQEQKSKEHHPAEA
PGGQKARYRKEQTLLKQLPCIPLVENLLKDGTDGCALAALIHFYCPAVVRLEDICLKETMSLADSLYNLQ
LIQEFCQEYLNHCCHFSLEDMLYAASSIKSNYLVFMAELFWWFEVVKPSFVQPRVVRPQGAEPAKDVPSV
PVLNAAKRNIRDSSSSSDFSSRYTRPQTHSSASGGIRRSSSMSYVDGFIGTWPKEKRTSVHGVSFDISFD
KEDSAQSSTPNRGIIRSVSNEGLTLNNSRASKHIRKNLSFKPVNGEEEESIEEELHVDPHGDLQSPMPLN
TNELNSNESTHYKLPNGALQNRVLLDEFGNQIETPSIEEALQIIHDTERPPHTPRPDQIANGFFLHGQDL
SILNSNIKLNQSSPDNLTDTKGALSPITDTTEVDTGIHVPSEDIPETMDEDSSLRDYTVSLDSDMDDASK
LLQDYDLRASNPREALSPCPSTISTKSQPGSSASSSSGVKMTSFAEQKFRKLNHTDGKSSGSSSQKTTPE
GSELNIPHVVSWAQIPEEAGVAPGRDTTQLLASEMVHLRMRLEEKRRAIEAQKKKMEAAFTKQRQKMGRT
AFLTVVKKKGEGISPLREEAAGAEDEKVYTDRAKERESQKMDGQRSKSLADIKESMETPPGRWLKSPTTP
VDPERQWNLTSPSEETLNEGEILEYTKSIEKLNSSLHFLQQEMQRLSLQQEMLMQMREQQAWVISPPQPS
PQKQIRDFKPRQAGLSSAAAPFSSDSPRPTHPSPQSSTRKSASFSVKNQRTPRPNELKITPLNRTLTPPR
SVDSLPRLRRFSPSQVPIQTRSFVCFGDDGEPQKEPKQKEEIKKEPSECKGTLGPCDHNPGEKEIKPVES
TVSEVLSQPITETVCVTPNEDQLSQPTEPPPKPVFPPTAPKNVNLIEVSLSDLKPPEKADVSVEKLDGES
DKEQFDDDQKVCCGFFFKDDQKAENDMAMKRAALLEKRLRREKETQLRKQQLEAEMEHKKEETRRKTEEE
RQKKEDERARREFIRQEYMRRKQLKLMEDMDTVIKPRPQAAKQKKQRPKSIHRDHIESPKTPIKGPPVSS
LSLASLNTGDSESVHSGKRTPRSESVEGFLSPSRCGSRNGEKDWENASTTSSVASGTEYTGPKLYKEPSA
KSNKHIIQNALAHCCLAGKVNEGQKKKILEEMEKSDANNFLILFRDSGCQFRSLYTYCPETEEINKLTGI
GPKSITKKMIEGLYKYNSDRKQFSHIPAKTLSASVDAITIHSHLWQTKRPVTPKKLLPTKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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