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Report for CCDS83433.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83433.2 Public Homo sapiens 9 DDX31 24 110 108 CCDS HistoryNCBI Gene:64794Re-query CCDS DB by CCDS ID:83433.2Re-query CCDS DB by GeneID:64794See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 83433.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000480876.3 ENSP00000479697.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000480876.3Link to Ensembl Protein Viewer:ENSP00000479697.2Re-query CCDS DB by Nucleotide ID:ENST00000480876Re-query CCDS DB by Protein ID:ENSP00000479697
Original member Current member NCBI NM_001322344.2 NP_001309273.2 Accepted alive Link to Nucleotide Sequence:NM_001322344.2Link to Protein Sequence:NP_001309273.2Re-query CCDS DB by Nucleotide ID:NM_001322344Re-query CCDS DB by Protein ID:NP_001309273Link to BLAST:NP_001309273.2

Chromosomal Locations for CCDS 83433.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132658302 132658358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132658671 132658735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132659710 132659780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132661208 132661251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132662261 132662336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132662439 132662695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132669860 132669934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGCAGCCGCCGACGGTTCGCTCTTCGACAACCCCAGGACGTTCTCCAGACGTCCCCCAGCCCAGGCGA
GTCGGCAAGCAAAGGCTACGAAAAGAAAATACCAAGCGTCCAGTGAGGCTCCCCCAGCGAAACGGAGGAA
CGAAACTTCATTTCTCCCAGCCAAGAAAACTAGTGTTAAAGAAACTCAGAGGACTTTTAAGGGGAACGCA
CAAAAAATGTTTTCTCCAAAGAAGCATTCGGTTAGCACAAGTGATAGAAACCAGGAGGAGAGACAGTGCA
TTAAGACTTCATCACTGTTTAAAAACAACCCTGACATTCCAGAACTCCACAGACCTGTGGTAAAGCAGGT
GCAAGAAAAAGTGTTTACTTCAGCTGCTTTTCATGAGCTGGGCCTCCACCCACATTTAATTTCCACAATA
AATACGGTCTTAAAAATGTCTAGTATGACCAGTGTTCAGAAGCAAAGTATTCCTGTGTTGCTGGAAGGCA
GAGATGCTCTCGTGAGATCCCAGACGGGCTCAGGTAAAACTCTTGCCTATTGCATCCCTGTGGTCCAGTC
CCTTCAAGCAATGGAGTCAAAAATACAGGTATTACTGTTATCCACATTTTACGAAGAAGAACAGAGGCTT
AGGAAAGTTAAATAA

Translation (214 aa):
MAAADGSLFDNPRTFSRRPPAQASRQAKATKRKYQASSEAPPAKRRNETSFLPAKKTSVKETQRTFKGNA
QKMFSPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHPHLISTI
NTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQVLLLSTFYEEEQRL
RKVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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