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Report for CCDS8307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8307.1 Public Homo sapiens 11 CCDC82 24 110 108 CCDS HistoryNCBI Gene:79780Re-query CCDS DB by CCDS ID:8307.1Re-query CCDS DB by GeneID:79780See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278520.9 ENSP00000278520.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000278520.9Link to Ensembl Protein Viewer:ENSP00000278520.5Re-query CCDS DB by Nucleotide ID:ENST00000278520Re-query CCDS DB by Protein ID:ENSP00000278520
Original member Current member EBI ENST00000423339.2 ENSP00000397156.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423339.2Link to Ensembl Protein Viewer:ENSP00000397156.2Re-query CCDS DB by Nucleotide ID:ENST00000423339Re-query CCDS DB by Protein ID:ENSP00000397156
Original member Current member EBI ENST00000530203.2 ENSP00000431148.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530203.2Link to Ensembl Protein Viewer:ENSP00000431148.2Re-query CCDS DB by Nucleotide ID:ENST00000530203Re-query CCDS DB by Protein ID:ENSP00000431148
Original member Current member EBI ENST00000645366.1 ENSP00000494629.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645366.1Link to Ensembl Protein Viewer:ENSP00000494629.1Re-query CCDS DB by Nucleotide ID:ENST00000645366Re-query CCDS DB by Protein ID:ENSP00000494629
Original member Current member EBI ENST00000646638.1 ENSP00000494657.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646638.1Link to Ensembl Protein Viewer:ENSP00000494657.1Re-query CCDS DB by Nucleotide ID:ENST00000646638Re-query CCDS DB by Protein ID:ENSP00000494657
Original member Current member EBI ENST00000645439.1 ENSP00000495063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645439.1Link to Ensembl Protein Viewer:ENSP00000495063.1Re-query CCDS DB by Nucleotide ID:ENST00000645439Re-query CCDS DB by Protein ID:ENSP00000495063
Original member Current member EBI ENST00000644686.1 ENSP00000495081.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644686.1Link to Ensembl Protein Viewer:ENSP00000495081.1Re-query CCDS DB by Nucleotide ID:ENST00000644686Re-query CCDS DB by Protein ID:ENSP00000495081
Original member Current member EBI ENST00000645500.1 ENSP00000495485.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645500.1Link to Ensembl Protein Viewer:ENSP00000495485.1Re-query CCDS DB by Nucleotide ID:ENST00000645500Re-query CCDS DB by Protein ID:ENSP00000495485
Original member Current member EBI ENST00000646818.2 ENSP00000496393.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000646818.2Link to Ensembl Protein Viewer:ENSP00000496393.1Re-query CCDS DB by Nucleotide ID:ENST00000646818Re-query CCDS DB by Protein ID:ENSP00000496393
Original member Current member EBI ENST00000680763.1 ENSP00000504912.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680763.1Link to Ensembl Protein Viewer:ENSP00000504912.1Re-query CCDS DB by Nucleotide ID:ENST00000680763Re-query CCDS DB by Protein ID:ENSP00000504912
Original member Current member EBI ENST00000679788.1 ENSP00000505510.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679788.1Link to Ensembl Protein Viewer:ENSP00000505510.1Re-query CCDS DB by Nucleotide ID:ENST00000679788Re-query CCDS DB by Protein ID:ENSP00000505510
Original member Current member EBI ENST00000679856.1 ENSP00000505833.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679856.1Link to Ensembl Protein Viewer:ENSP00000505833.1Re-query CCDS DB by Nucleotide ID:ENST00000679856Re-query CCDS DB by Protein ID:ENSP00000505833
Original member Current member EBI ENST00000680171.1 ENSP00000505858.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680171.1Link to Ensembl Protein Viewer:ENSP00000505858.1Re-query CCDS DB by Nucleotide ID:ENST00000680171Re-query CCDS DB by Protein ID:ENSP00000505858
Original member Current member EBI ENST00000680979.1 ENSP00000505977.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680979.1Link to Ensembl Protein Viewer:ENSP00000505977.1Re-query CCDS DB by Nucleotide ID:ENST00000680979Re-query CCDS DB by Protein ID:ENSP00000505977
Original member Current member EBI ENST00000679960.1 ENSP00000506164.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679960.1Link to Ensembl Protein Viewer:ENSP00000506164.1Re-query CCDS DB by Nucleotide ID:ENST00000679960Re-query CCDS DB by Protein ID:ENSP00000506164
Original member Current member EBI ENST00000681164.1 ENSP00000506296.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681164.1Link to Ensembl Protein Viewer:ENSP00000506296.1Re-query CCDS DB by Nucleotide ID:ENST00000681164Re-query CCDS DB by Protein ID:ENSP00000506296
Original member Current member EBI ENST00000679708.1 ENSP00000506371.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679708.1Link to Ensembl Protein Viewer:ENSP00000506371.1Re-query CCDS DB by Nucleotide ID:ENST00000679708Re-query CCDS DB by Protein ID:ENSP00000506371
Original member Current member NCBI NM_001318736.2 NP_001305665.1 Accepted alive Link to Nucleotide Sequence:NM_001318736.2Link to Protein Sequence:NP_001305665.1Re-query CCDS DB by Nucleotide ID:NM_001318736Re-query CCDS DB by Protein ID:NP_001305665Link to BLAST:NP_001305665.1
Original member Current member NCBI NM_024725.4 NP_079001.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024725.4Link to Protein Sequence:NP_079001.2Re-query CCDS DB by Nucleotide ID:NM_024725Re-query CCDS DB by Protein ID:NP_079001Link to BLAST:NP_079001.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305665.1 544 Q8N4S0-1 544 100% 0 0
NP_079001.2 544 Q8N4S0-1 544 100% 0 0

Chromosomal Locations for CCDS 8307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 96353646 96353714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96358993 96359178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96364980 96365150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96371013 96371137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96373375 96373467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96383269 96383473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 96383962 96384747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGATACATGTTAGAAGACATGAAACAAGGAGAAATTCTAAGAGTCACGTGCCTGAGCAGAAATCTCGAG
TTGATTGGAGGCGAACTAAAAGAAGTAGTATCTCACAATTACTTGATAGTGATGAAGAGCTTGATAGTGA
AGAATTTGATAGTGATGAAGAGCTTGATAGTGATGAAAGTTTTGAAAATGATGAAGAGCTTGATAGTAAC
AAGGGACCTGATTGTAATAAAACACCAGGAAGTGAAAGAGAGCTCAACTTAAGTAAAATTCAAAGTGAAG
GAAATGACAGTAAGTGTCTCATTAACTCTGGCAACGGTTCAACATATGAAGAAGAAACGAACAAAATCAA
ACATAGGAATATTGACTTACAAGATCAGGAAAAACATTTAAGTCAAGAGGATAATGATCTCAACAAACAA
ACTGGACAAATAATAGAGGATGATCAGGAAAAACATTTAAGTCAAGAGGATAATGATCTCAACAAACAAA
CTGGACAAATAATAGAGGATGATTTAGAAGAAGAAGACATCAAGCGAGGAAAAAGAAAAAGGCTATCCTC
TGTGATGTGTGACAGTGATGAGAGTGATGACAGCGATATCCTAGTTAGAAAAGTAGGTGTTAAACGTCCC
CGTAGAGTGGTTGAAGATGAAGGTTCTTCAGTGGAAATGGAGCAAAAGACTCCTGAAAAAACATTAGCTG
CACAAAAGCGAGAAAAACTTCAGAAGCTCAAAGAACTCTCAAAACAAAGATCTCGTCAGAGACGCAGTAG
TGGTAGAGATTTTGAGGACTCTGAAAAGGAATCTTGCCCAAGCAGTGATGAAGTTGATGAGGAGGAAGAA
GAGGATAATTATGAATCTGATGAAGATGGAGATGATTATATTATCGATGACTTTGTAGTGCAAGATGAGG
AGGGTGATGAAGAGAATAAAAACCAACAAGGAGAAAAATTGACTACATCACAACTGAAATTAGTAAAACA
GAATTCTCTTTATTCTTTTAGTGACCACTATACTCATTTTGAAAGAGTTGTGAAGGCTCTTCTGATCAAC
GCTTTAGATGAATCTTTTCTGGGAACATTATATGATGGCACAAGGCAAAAATCATATGCAAAAGATATGC
TAACATCTCTTCATTATTTGGATAACCGCTTTGTTCAGCCTCGTCTAGAGAGCTTGGTATCTAGAAGTCG
TTGGAAAGAGCAATATAAGGAGCGAGTAGAAAATTATTCTAATGTAAGTATTCATTTGAAGAATCCTGAA
AACTGTTCCTGCCAGGCTTGTGGACTGCATCGCTACTGTAAATATTCAGTGCATTTATCAGGAGAGTTGT
ATAACACCAGGACCATGCAAATAGATAATTTCATGTCACATGATAAACAGGTGTTCACTGTTGGCAGAAT
TTGTGCCAGCCGTACCAGAATTTATCATAAACTGAAACATTTTAAATTCAAACTATACCAGGAATGTTGC
ACCATTGCAATGACAGAAGAAGTTGAAGATGAACAAGTTAAAGAAACAGTGGAAAGAATTTTCAGGCGGT
CAAAAGAAAATGGCTGGATTAAGGAGAAATATGGTCAACTTGAAGAATATCTCAATTTTGCGGATTACTT
TCAAGAAGAGAAGTTTGAGTTGTAA

Translation (544 aa):
MIHVRRHETRRNSKSHVPEQKSRVDWRRTKRSSISQLLDSDEELDSEEFDSDEELDSDESFENDEELDSN
KGPDCNKTPGSERELNLSKIQSEGNDSKCLINSGNGSTYEEETNKIKHRNIDLQDQEKHLSQEDNDLNKQ
TGQIIEDDQEKHLSQEDNDLNKQTGQIIEDDLEEEDIKRGKRKRLSSVMCDSDESDDSDILVRKVGVKRP
RRVVEDEGSSVEMEQKTPEKTLAAQKREKLQKLKELSKQRSRQRRSSGRDFEDSEKESCPSSDEVDEEEE
EDNYESDEDGDDYIIDDFVVQDEEGDEENKNQQGEKLTTSQLKLVKQNSLYSFSDHYTHFERVVKALLIN
ALDESFLGTLYDGTRQKSYAKDMLTSLHYLDNRFVQPRLESLVSRSRWKEQYKERVENYSNVSIHLKNPE
NCSCQACGLHRYCKYSVHLSGELYNTRTMQIDNFMSHDKQVFTVGRICASRTRIYHKLKHFKFKLYQECC
TIAMTEEVEDEQVKETVERIFRRSKENGWIKEKYGQLEEYLNFADYFQEEKFEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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