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Report for CCDS82308.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82308.2 Public Homo sapiens 19 WIZ 24 110 108 CCDS HistoryNCBI Gene:58525Re-query CCDS DB by CCDS ID:82308.2Re-query CCDS DB by GeneID:58525See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 82308.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000674089.4 ENSP00000501256.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674089.4Link to Ensembl Protein Viewer:ENSP00000501256.3Re-query CCDS DB by Nucleotide ID:ENST00000674089Re-query CCDS DB by Protein ID:ENSP00000501256
Original member Current member NCBI NM_001330395.4 NP_001317324.2 Accepted alive Link to Nucleotide Sequence:NM_001330395.4Link to Protein Sequence:NP_001317324.2Re-query CCDS DB by Nucleotide ID:NM_001330395Re-query CCDS DB by Protein ID:NP_001317324Link to BLAST:NP_001317324.2

Chromosomal Locations for CCDS 82308.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15423076 15423235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15424183 15424378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15424613 15425032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15425241 15425768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15426982 15427533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15429586 15430089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15431012 15431182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15432434 15432704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2802 nt):
ATGGCCGCCTCCACCGCCCAGTGCCGAGTGACAAAAGCGGAGAGCAAGGCGGCGGCGGGGCCGCGCGCGG
GGGGCGCCCGGGAGCGCGCGCCCGCGGGGGCGCCCCCGCCCAGCCCCCCGAGCCCGGGCCCCGCGGCACC
CCCCGCGCCGCCGCCGCCGCCCCCACCCCCGCCGCCGCCGCCACCACCACCGCCACCGCCACCGCCGCCG
CGGGACGGGCCCAAGGCCGAGCCGGAGCCGGGGCCCGGGCCCGCGTCCGCTCCCGCGCCCGGCCTGGGTT
CTGAGGAAAACGCAATGGTGGCCATGGACTTGGGCTCTCCCTCGCTCCCTAAGAAGAGCCTGCCTGTCCC
TGGGGCCCTGGAGCAGGTGGCCAGTCGGCTGAGCAGCAAAGTGGCTGCAGAGGTTCCTCATGGCAGCAAA
CAGGAGCTGCAGGACCTCAAGGCCCAGAGCCTGACCACCTGCGAGGTCTGCGGTGCCTGCTTTGAGACCC
GAAAGGGCCTGTCCAGCCACGCGCGCTCCCACCTGCGGCAGCTGGGAGTGGCAGAGTCGGAAAGCAGCGG
CGCACCCATCGACCTCCTCTACGAGCTTGTGAAGCAGAAGGGTCTGCCTGACGCCCACCTTGGGCTGCCC
CCAGGCCTGGCTAAGAAGTCCAGCTCACTGAAGGAGGTGGTCGCCGGGGCCCCCCGGCCCGGCTTGCTCA
GCCTGGCCAAGCCCTTGGATGCCCCTGCTGTCAACAAAGCCATCAAGTCGCCTCCCGGCTTCTCGGCCAA
GGGCCTGGGCCACCCGCCCAGCTCTCCACTCCTCAAAAAGACACCACTGGCCCTGGCGGGCTCCCCTACC
CCTAAGAATCCTGAGGACAAGAGCCCCCAGCTGTCCCTGAGCCCCCGGCCGGCCTCCCCAAAGGCACAGT
GGCCTCAGTCTGAGGATGAGGGGCCCTTGAACCTCACCTCAGGCCCAGAGCCAGCACGAGACATCCGCTG
CGAGTTCTGTGGTGAGTTCTTCGAGAACCGCAAGGGCCTCTCGAGCCACGCGCGCTCCCATCTGCGGCAA
ATGGGCGTGACCGAGTGGTACGTCAATGGCTCGCCCATCGACACGCTGCGGGAGATCCTGAAGAGACGGA
CCCAGTCTCGGCCTGGTGGACCTCCCAACCCACCAGGGCCAAGCCCAAAAGCCCTGGCCAAGATGATGGG
CGGCGCAGGTCCTGGCAGCTCACTGGAAGCCCGCAGCCCCTCGGACCTTCACATCTCACCCTTGGCCAAG
AAGTTGCCACCACCACCGGGCAGCCCCCTGGGCCACTCACCAACTGCCTCTCCTCCTCCTACGGCCCGAA
AGATGTTCCCAGGCCTGGCTGCACCCTCCTTGCCCAAGAAGCTGAAGCCTGAACAAATACGGGTGGAGAT
CAAGCGGGAGATGCTGCCGGGGGCCCTTCATGGGGAACTGCACCCATCTGAGGGTCCCTGGGGGGCACCA
CGGGAAGACATGACACCCCTGAACCTGTCGTCCCGGGCAGAGCCGGTGCGCGACATCCGCTGTGAGTTCT
GCGGCGAGTTCTTCGAGAACCGCAAGGGCCTGTCGAGTCACGCGCGCTCACACCTGCGGCAGATGGGTGT
GACCGAGTGGTCCGTCAATGGTTCGCCCATCGACACACTGCGAGAGATCCTCAAGAAGAAGTCCAAGCCG
TGCCTCATCAAGAAGGAGCCACCGGCTGGAGACCTGGCCCCTGCCCTGGCTGAGGACGGGCCTCCCACCG
TGGCCCCTGGGCCCGTGCAGTCCCCACTGCCGCTGTCGCCCCTGGCTGGCCGGCCAGGCAAACCAGGTGC
AGGGCCGGCCCAGGTTCCTCGTGAGCTCAGCCTGACGCCCATCACTGGGGCCAAGCCCTCAGCCACTGGC
TACCTGGGCTCAGTGGCAGCCAAGCGGCCCCTGCAGGAGGACCGCCTCCTCCCAGCAGAGGTCAAGGCCA
AGACCTACATCCAGACTGAACTGCCCTTCAAGGCAAAGACCCTTCATGAGAAGACCTCCCACTCCTCCAC
CGAGGCCTGCTGCGAGCTGTGTGGCCTTTACTTTGAAAACCGCAAGGCCCTGGCCAGCCACGCACGGGCA
CACCTGCGGCAGTTCGGCGTGACCGAGTGGTGCGTCAATGGCTCGCCCATCGAGACACTGAGCGAGTGGA
TCAAACACCGGCCCCAGAAGGTGGGCGCCTACCGCAGCTACATCCAGGGCGGCCGCCCCTTCACCAAGAA
GTTCCGCAGTGCCGGCCATGGCCGTGACAGTGACAAGCGGCCGTCCCTGGGGCTGGCACCCGGGGGCCTG
GCCGTGGTCGGCCGCAGTGCCGGAGGGGAGCCAGGGCCCGAGGCTGGCCGGGCAGCCGACGGTGGTGAGC
GGCCTCTGGCAGCCAGCCCGCCAGGCACCGTGAAGGCTGAGGAGCACCAGCGGCAGAACATCAACAAATT
TGAACGCCGACAAGCCCGCCCTCCAGATGCCTCCGCAGCCCGGGGAGGCGAGGACACCAATGACCTACAG
CAGAAGCTGGAGGAGGTGCGGCAACCCCCACCCCGAGTCCGGCCAGTCCCCTCCCTGGTGCCCCGGCCCC
CCCAGACATCACTTGTCAAGTTCGTGGGCAACATCTACACCCTCAAATGCAGGTTCTGTGAGGTGGAATT
CCAGGGCCCCCTCTCCATCCAGGAAGAGTGGGTGCGGCACTTACAGCGGCACATCCTGGAGATGAACTTC
TCCAAAGCGGACCCCCCACCTGAGGAGTCCCAGGCCCCGCAGGCACAGACAGCGGCGGCAGAGGCTCCCT
AA

Translation (933 aa):
MAASTAQCRVTKAESKAAAGPRAGGARERAPAGAPPPSPPSPGPAAPPAPPPPPPPPPPPPPPPPPPPPP
RDGPKAEPEPGPGPASAPAPGLGSEENAMVAMDLGSPSLPKKSLPVPGALEQVASRLSSKVAAEVPHGSK
QELQDLKAQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELVKQKGLPDAHLGLP
PGLAKKSSSLKEVVAGAPRPGLLSLAKPLDAPAVNKAIKSPPGFSAKGLGHPPSSPLLKKTPLALAGSPT
PKNPEDKSPQLSLSPRPASPKAQWPQSEDEGPLNLTSGPEPARDIRCEFCGEFFENRKGLSSHARSHLRQ
MGVTEWYVNGSPIDTLREILKRRTQSRPGGPPNPPGPSPKALAKMMGGAGPGSSLEARSPSDLHISPLAK
KLPPPPGSPLGHSPTASPPPTARKMFPGLAAPSLPKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAP
REDMTPLNLSSRAEPVRDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKSKP
CLIKKEPPAGDLAPALAEDGPPTVAPGPVQSPLPLSPLAGRPGKPGAGPAQVPRELSLTPITGAKPSATG
YLGSVAAKRPLQEDRLLPAEVKAKTYIQTELPFKAKTLHEKTSHSSTEACCELCGLYFENRKALASHARA
HLRQFGVTEWCVNGSPIETLSEWIKHRPQKVGAYRSYIQGGRPFTKKFRSAGHGRDSDKRPSLGLAPGGL
AVVGRSAGGEPGPEAGRAADGGERPLAASPPGTVKAEEHQRQNINKFERRQARPPDASAARGGEDTNDLQ
QKLEEVRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNF
SKADPPPEESQAPQAQTAAAEAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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