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Report for CCDS81301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81301.1 Public Homo sapiens 1 OSCP1 24 110 108 CCDS HistoryNCBI Gene:127700Re-query CCDS DB by CCDS ID:81301.1Re-query CCDS DB by GeneID:127700See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356637.9 ENSP00000349052.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356637.9Link to Ensembl Protein Viewer:ENSP00000349052.5Re-query CCDS DB by Nucleotide ID:ENST00000356637Re-query CCDS DB by Protein ID:ENSP00000349052
Original member Current member NCBI NM_001330493.2 NP_001317422.1 Accepted alive Link to Nucleotide Sequence:NM_001330493.2Link to Protein Sequence:NP_001317422.1Re-query CCDS DB by Nucleotide ID:NM_001330493Re-query CCDS DB by Protein ID:NP_001317422Link to BLAST:NP_001317422.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317422.1 389 Q8WVF1-1 389 100% 0 0

Chromosomal Locations for CCDS 81301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36418139 36418255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36418991 36419054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36420476 36420615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36422150 36422219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36422768 36422896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36423363 36423466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36431802 36431882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36432422 36432589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36438756 36438910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36444004 36444033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36450258 36450369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGTCGGTGCGGACGCTACCGCTGCTCTTCTTGAACTTGGGCGGGGAGATGCTTTACATCCTCGACCAAC
GGCTGCGGGCCCAGAACATCCCGGGAGACAAGGCCCGCAAAGATGAATGGACAGAGGTGGACAGAAAACG
AGTTCTGAATGACATCATCTCCACCATGTTCAATAGAAAGTTTATGGAGGAATTATTCAAGCCTCAAGAG
CTCTACTCCAAGAAGGCCCTGAGGACTGTCTATGAGCGCCTGGCTCATGCCTCCATTATGAAACTGAACC
AGGCCAGCATGGATAAGCTCTATGACCTGATGACCATGGCTTTCAAATATCAAGTATTGCTGTGTCCCCG
ACCCAAGGATGTGCTGCTGGTCACTTTCAATCACTTGGATACCATCAAGGGATTCATCCGAGACTCCCCA
ACCATCCTGCAGCAAGTGGACGAGACTTTGCGGCAGCTGACAGAAATATATGGTGGTCTCTCTGCAGGGG
AGTTCCAGCTGATCCGGCAGACACTCCTCATCTTCTTCCAAGACCTGCACATCCGAGTATCCATGTTTCT
AAAGGACAAAGTTCAGAATAATAACGGTCGCTTTGTGTTGCCGGTGTCCGGGCCTGTTCCTTGGGGAACT
GAAGTTCCAGGACTCATCAGAATGTTCAACAACAAAGGTGAAGAAGTGAAGAGGATAGAATTCAAGCATG
GTGGAAACTATGTCCCTGCACCCAAAGAAGGTTCTTTTGAACTTTATGGAGACCGAGTCCTGAAACTGGG
AACTAACATGTACAGCGTGAATCAGCCTGTGGAAACTCATGTGTCTGGATCATCAAAGAACTTAGCCTCA
TGGACCCAGGAAAGCATTGCTCCAAACCCTCTTGCTAAAGAAGAGCTGAATTTCTTGGCCAGGCTGATGG
GAGGGATGGAGATTAAGAAACCCAGTGGCCCTGAGCCCGGATTCCGGTTGAATCTCTTTACCACCGATGA
AGAAGAGGAACAAGCAGCGCTAACCAGGCCAGAAGAGTTATCCTATGAAGTTATCAACATACAAGCCACC
CAGGACCAGCAACGGAGCGAGGAGCTGGCTCGAATCATGGGGGAGTTTGAGATCACGGAGCAGCCAAGGC
TGAGCACCAGCAAAGGGGACGATTTGCTCGCCATGATGGATGAGTTATAG

Translation (389 aa):
MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDIISTMFNRKFMEELFKPQE
LYSKKALRTVYERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDSP
TILQQVDETLRQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVLPVSGPVPWGT
EVPGLIRMFNNKGEEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLAS
WTQESIAPNPLAKEELNFLARLMGGMEIKKPSGPEPGFRLNLFTTDEEEEQAALTRPEELSYEVINIQAT
QDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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