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Report for CCDS80742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80742.1 Public Mus musculus 7 Nmb 23 108 98 CCDS HistoryNCBI Gene:68039Re-query CCDS DB by CCDS ID:80742.1Re-query CCDS DB by GeneID:68039See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80742.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119428.1 ENSMUSP00000113407.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119428.1Link to Ensembl Protein Viewer:ENSMUSP00000113407.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119428Re-query CCDS DB by Protein ID:ENSMUSP00000113407
Original member Current member NCBI NM_001291280.1 NP_001278209.1 Accepted alive Link to Nucleotide Sequence:NM_001291280.1Link to Protein Sequence:NP_001278209.1Re-query CCDS DB by Nucleotide ID:NM_001291280Re-query CCDS DB by Protein ID:NP_001278209Link to BLAST:NP_001278209.1

Chromosomal Locations for CCDS 80742.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 80902433 80902498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80904134 80904306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80904821 80904977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGACCCGGCAAGCAGGGAGCTCTTGGCTCCTCCGTGGTCTCCTGCTCTTCGCATTGTTCGCTTCCGGCG
TCGCTCCCTTCAACTGGGATCTCCCGGAGCCCCGCAGCCGAGCAAGCAAGATTCGAGTGCACCCTCGGGG
CAACCTCTGGGCGACCGGTCACTTCATGGGCAAGAAGAGCCTGGAACCCCCGAGCCTGTCACTGGTGGGG
ACAGCACCCCCTAACACCCCGAGGGACCAGAGACTACAGCTGAGTCATGATCTGCTCAGGATCCTCCTGC
GAAAGAAAGCTCTAGGCATGAACTTCAGTGGCCCAGCTCCCCCAATCCAGGAGGCTGCTGGAGCCACTAC
TGCAGAAGTGATGCCAATAATGGAACAAACCGGATGCTGGGCTTAG

Translation (131 aa):
MTRQAGSSWLLRGLLLFALFASGVAPFNWDLPEPRSRASKIRVHPRGNLWATGHFMGKKSLEPPSLSLVG
TAPPNTPRDQRLQLSHDLLRILLRKKALGMNFSGPAPPIQEAAGATTAEVMPIMEQTGCWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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