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Report for CCDS8035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8035.1 Public Homo sapiens 11 TAF6L 24 110 108 CCDS HistoryNCBI Gene:10629Re-query CCDS DB by CCDS ID:8035.1Re-query CCDS DB by GeneID:10629See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294168.8 ENSP00000294168.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000294168.8Link to Ensembl Protein Viewer:ENSP00000294168.3Re-query CCDS DB by Nucleotide ID:ENST00000294168Re-query CCDS DB by Protein ID:ENSP00000294168
Original member Current member NCBI NM_006473.4 NP_006464.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006473.4Link to Protein Sequence:NP_006464.1Re-query CCDS DB by Nucleotide ID:NM_006473Re-query CCDS DB by Protein ID:NP_006464Link to BLAST:NP_006464.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006464.1 622 Q9Y6J9 622 100% 0 0

Chromosomal Locations for CCDS 8035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62775784 62775930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62776384 62776470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62777978 62778128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62778285 62778335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62778869 62778963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62781894 62781968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62782113 62782333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62782693 62782825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62786260 62786388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62786517 62787296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGTCAGAGCGAGAAGAGCGGCGGTTTGTGGAGATCCCTCGGGAGTCTGTCCGGCTCATGGCGGAGAGCA
CGGGCCTGGAGCTGAGCGATGAGGTGGCGGCGCTGCTCGCAGAGGACGTGTGCTATCGTCTGAGAGAGGC
CACGCAGAATAGCTCTCAGTTCATGAAGCACACCAAACGCCGGAAGCTGACGGTTGAGGACTTCAACAGG
GCCCTCAGATGGAGCAGCGTGGAGGCTGTGTGTGGTTACGGATCACAGGAGGCACTGCCCATGCGCCCCG
CCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGGTGAACCTGGTGGAGCTGGCCCTGGCTACCAA
CATCCCCAAAGGCTGTGCTGAGACAGCTGTCAGAGTTCATGTCTCCTACCTGGATGGCAAAGGGAACCTG
GCACCTCAAGGATCGGTGCCCAGTGCTGTGTCTTCACTGACAGATGACCTTCTCAAGTACTATCACCAGG
TGACTCGTGCTGTGCTAGGGGATGATCCGCAACTGATGAAGGTTGCACTCCAGGACTTGCAGACGAACTC
CAAGATTGGGGCACTCCTGCCTTACTTTGTTTATGTGGTCAGTGGGGTGAAATCTGTAAGCCATGACCTG
GAGCAACTGCACCGGCTGCTGCAGGTGGCACGGAGCCTATTTCGTAATCCGCACCTGTGCTTGGGGCCCT
ATGTCCGCTGTCTGGTGGGCAGTGTCCTCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCCCT
GAATGACCACTGGACTCTGCGGGATGGGGCTGCCCTCCTGCTCAGCCACATCTTCTGGACTCATGGGGAC
CTTGTAAGTGGCCTCTATCAGCATATCCTGCTATCCCTGCAGAAGATCCTGGCAGATCCTGTGCGGCCGC
TCTGCTGCCACTATGGAGCCGTGGTGGGGCTGCATGCTCTTGGCTGGAAGGCAGTAGAACGAGTCCTGTA
CCCACACCTGTCCACCTACTGGACAAACTTGCAGGCTGTGCTGGATGATTATTCAGTATCTAATGCCCAG
GTCAAAGCAGATGGACACAAAGTCTATGGAGCCATTCTGGTGGCGGTAGAGCGACTGCTGAAGATGAAGG
CCCAGGCAGCAGAGCCCAACAGGGGTGGCCCAGGTGGCAGGGGGTGCCGGCGCCTGGACGACCTGCCATG
GGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGGCCTCCCG
CTGCCGCCAGGGGGCGCGGGGCCGGAGGACCCTTCTCTTTCGGTGACCCTGGCCGACATCTACCGGGAGC
TCTACGCCTTCTTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCG
GCCGCCCGGGGACAAGAAGGAGCCGGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACGGCA
AGCGCCATAGTCAGCCCGCACGGCGACGAGAGCCCCCGGGGCAGCGGCGGAGGCGGCCCCGCGTCGGCCT
CTGGGCCCGCCGCCTCTGAGAGCAGGCCCTTGCCGCGCGTGCATCGGGCGCGCGGGGCACCCCGGCAGCA
GGGCCCCGGGACCGGCACCCGCGACGTTTTCCAGAAGAGCCGTTTCGCCCCGCGCGGCGCCCCGCACTTT
CGTTTCATCATAGCCGGGCGGCAGGCTGGGAGGCGCTGCCGCGGGCGCCTTTTCCAGACTGCCTTCCCCG
CGCCGTACGGGCCTAGCCCGGCCTCGCGCTACGTGCAGAAACTGCCCATGATCGGCCGTACCAGCCGCCC
CGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGTACTTGCCGCTCTGA

Translation (622 aa):
MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR
ALRWSSVEAVCGYGSQEALPMRPAREGELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNL
APQGSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDL
EQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGD
LVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQ
VKADGHKVYGAILVAVERLLKMKAQAAEPNRGGPGGRGCRRLDDLPWDSLLFQESSSGGGAEPSFGSGLP
LPPGGAGPEDPSLSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPDSVRKMPQLTA
SAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGPGTGTRDVFQKSRFAPRGAPHF
RFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPMIGRTSRPARRWALSDYSLYLPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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