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Report for CCDS79409.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79409.1 Public Mus musculus 15 Fmnl3 23 108 98 CCDS HistoryNCBI Gene:22379Re-query CCDS DB by CCDS ID:79409.1Re-query CCDS DB by GeneID:22379See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79409.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120633.1 ENSMUSP00000113094.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120633.1Link to Ensembl Protein Viewer:ENSMUSP00000113094.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120633Re-query CCDS DB by Protein ID:ENSMUSP00000113094
Original member Current member NCBI NM_001310622.1 NP_001297551.1 Accepted alive Link to Nucleotide Sequence:NM_001310622.1Link to Protein Sequence:NP_001297551.1Re-query CCDS DB by Nucleotide ID:NM_001310622Re-query CCDS DB by Protein ID:NP_001297551Link to BLAST:NP_001297551.1

Chromosomal Locations for CCDS 79409.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99318284 99318372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99319131 99319254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99319562 99319654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99319985 99320086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99320353 99320513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99321036 99321165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99321255 99321335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99321434 99321502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99321631 99321865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99322195 99322397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99322603 99322727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99322812 99322880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99323320 99323599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99324741 99324842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99325241 99325390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99325643 99325753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99325854 99325928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99327515 99327608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99327821 99327897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99328058 99328166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99329280 99329432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99331987 99332070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99334854 99334930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99335688 99335768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99337630 99337713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99370177 99370302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3084 nt):
ATGGGCAACCTGGAGAGCACCGACGGTGGCCCGGGCGAGCCGCCCTCCGTCCCGCTGCTGCTGCCGCCCG
GCAAGACGCCGATGCCCGAGCCGTGCGAGCTGGAAGAGAGATTCGCCCTAGTGCTGAGCTCTATGAACCT
GCCTCCTGACAAGGCCCGGCTGCTGCGACAGTATGACAACGAGAAGAAGTGGGATCTGATCTGTGACCAG
GAAAGATTTCAAGTAAAGAATCCTCCCCACACCTATATCCAGAAACTCCAGAGCTTCTTGGACCCCAATG
TAACACGGAAGAAGTTCCGGAGGAGAGTGCAGGAGTCCACTAAAGTCCTACGGGAGCTGGAGATCTCACT
TCGCACCAATCACATTGGGTGGGTGAGGGAGTTTCTCAATGATGAGAACAAAGGCCTGGACGTGCTGGTG
GATTACCTGTCATTTGCCCAGTGTTCTGTCATGTTTGACTTTGAGGGTCTGGAGAGTGGTGATGACGGTG
CATTTGACAAGCTCCGGTCCTGGAGCAGGTCAATCGAGGACCTGCAACCGCCCAACGCCCTGTCGGCCCC
CTTCACCAACAGCCTCGCTCGCTCTGCGCGTCAGTCCGTGCTCCGGTACAGTACTCTCCCTGGCCGCAGG
GCCCTGAAGAACTCCCGCCTGGTGAGCCAGAAGGATGACGTCCATGTCTGCATCCTTTGTCTCAGAGCCA
TCATGAACTATCAGTATGGCTTCAACTTGGTCATGTCCCACCCCCACGCTGTCAATGAGATTGCACTTAG
CCTCAACAACAAGAATCCAAGGACCAAAGCCCTGGTCTTGGAGCTGCTGGCAGCTGTGTGTTTGGTGCGG
GGAGGTCATGAAATCATCCTGGCTGCCTTTGACAATTTCAAAGAGGTGTGTAAAGAACTGCATCGGTTTG
AGAAGCTCATGGAGTATTTCCGAAATGAGGACAGCAACATTGACTTCATGGTGGCCTGCATGCAGTTCAT
CAACATTGTGGTGCACTCGGTAGAGGACATGAACTTCCGGGTCCACCTGCAATATGAGTTTACCAAGTTG
GGGCTGGAGGAATTCCTCCAGAAGTCGAGGCACACGGAGAGCGAGAAGTTGCAGGTGCAGATTCAAGCGT
ACCTGGACAATGTGTTTGACGTGGGGGGCTTGTTGGAAGATGCAGAAACCAAGAATGTAGCCCTGGAAAA
GGTGGAAGAACTGGAGGAGCATGTGTCCCATCTCACAGAGAAGCTCCTGGACCTGGAGAATGAGAATATG
ATGCGGGTGGCAGAACTGGAGAAGCAGCTGCTACAGCGGGAAAAGGAGCTGGAGAGCATCAAGGAGACAT
ATGAGAACACAAGCAACCAGGTGCATACTCTTCGGAGGCTCATTAAGGAAAAGGAGGAGGCCTTCCAGCG
CCGATGCCACCTGGAGCCAAGTGCCCGGGGCCTGGAATCCATGGGCGGCGAGGCCCTAGCCAGGGTAGGC
CCTACAGAGTTGACTGAAGGCATCCCACCCTCTGACTTGGACCTGCTGGCTCCAGCCCCACCTACTGAGG
AGACTCTTCCTCTGCCTCCTCCACCAGCTCCCCCTTTGCCTCCGCCCCCTCCTCCACTACCAGACAAGTG
TCCCCCTGCCCCACCTCTCCCTGGTGCTGCTCCTTCTGTGGTGTTGACAGTGGGCCTGTCAGCCATTCGC
ATCAAGAAACCTATCAAGACCAAGTTCCGGTTGCCAGTCTTCAACTGGACAGCACTAAAACCCAATCAGA
TCAATGGCACTGTCTTCAGTGAACTTGATGATGAGAAGATTTTGGAGGACTTAGACCTGGACAGGTTTGA
AGAGTTATTTAAGACAAAAGCCCAGGGCCCTGCTCTTGATCTCATCTGCTCCAAGAATAAGACAGCACAA
AAGGCTGCCAGCAAGGTGACCCTTTTGGAAGCCAATCGTGCCAAGAACCTGGCTATCACCCTTCGCAAGG
CTGGGCGCTCAGCTGAGGAGATCTGCAGGGCCATCCACACGTTTGACTTACAGACACTACCTGTAGACTT
CGTGGAATGCCTGATGCGCTTCCTGCCTACAGAGGCAGAGGTGAAACTGTTGCGGCAGTATGAGCGTGAA
CGACAGCCACTAGAGGAGCTGGCAGCTGAGGACCGCTTCATGTTGCTCTTCAGCAAGGTGGAACGGCTGA
CCCAGCGAATGGCTGGCATGGCCTTTCTTGGCAACTTCCAGGACAATCTGCAGATGCTCACACCGCAACT
GAATGCCATCATTGCAGCCTCTGCCTCCGTCAAGTCCTCACAGAAACTGAAGCAGATGCTGGAGATCATC
CTTGCATTGGGGAACTACATGAACAGCAGCAAGCGAGGTGCTGTCTACGGCTTCAAGCTCCAGAGCCTGG
ACCTGCTGCTGGACACCAAGTCCACGGACCGAAAGATGACCCTGCTGCACTTCATTGCCTTGACGGTGAA
GGAGAAATACCCGGAACTGGCTAACTTCTGGCAGGAGCTGCACTTTGTGGAGAAGGCTGCAGCAGTGTCC
CTGGAGAACGTGCTGCTAGACGTGAAAGAGCTGGGCCGGGGAATGGAGCTGATTCGGCGGGAATGCAGCA
TTCATGACAACAGCGTCCTTCGAAACTTCCTTAGTACCAATGAAGGCAAACTGGACAAGCTCCAGCGTGA
TGCCAAGACTGCCGAGGAGGCCTACAATGCAGTTGTGCGCTACTTTGGTGAGAGTCCCAAGACCACACCT
CCTTCTGTGTTTTTCCCAGTATTTGTCCGATTCATTCGTTCTTACAAGGAAGCAGAACAAGAGAATGAAG
CTCGCAAGAAACAAGAGGAGGTAATGCGGGAGAAGCAGCTGGCTCAGGAAGCCAAGAAGCTGGATGCCAA
GACTCCATCCCAGCGGAACAAATGGCAACAGCAGGAGCTAATTGCAGAGCTGAGGCGGCGCCAAGCTAAG
GAACACCGGCCTGTTTACGAGGGGAAGGATGGTACCATTGAGGACATCATCACAGGCTTTAACCACCAAC
GCATGGTCGTTCACAGTCAAGTCAGGAGTGCTGTACCACCCAGTGGCCCTCCTCGAGCTCCAGGTCCCCA
CTGA

Translation (1027 aa):
MGNLESTDGGPGEPPSVPLLLPPGKTPMPEPCELEERFALVLSSMNLPPDKARLLRQYDNEKKWDLICDQ
ERFQVKNPPHTYIQKLQSFLDPNVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDENKGLDVLV
DYLSFAQCSVMFDFEGLESGDDGAFDKLRSWSRSIEDLQPPNALSAPFTNSLARSARQSVLRYSTLPGRR
ALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVR
GGHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKL
GLEEFLQKSRHTESEKLQVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENM
MRVAELEKQLLQREKELESIKETYENTSNQVHTLRRLIKEKEEAFQRRCHLEPSARGLESMGGEALARVG
PTELTEGIPPSDLDLLAPAPPTEETLPLPPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVLTVGLSAIR
IKKPIKTKFRLPVFNWTALKPNQINGTVFSELDDEKILEDLDLDRFEELFKTKAQGPALDLICSKNKTAQ
KAASKVTLLEANRAKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERE
RQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEII
LALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVS
LENVLLDVKELGRGMELIRRECSIHDNSVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTP
PSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREKQLAQEAKKLDAKTPSQRNKWQQQELIAELRRRQAK
EHRPVYEGKDGTIEDIITGFNHQRMVVHSQVRSAVPPSGPPRAPGPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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