NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS78585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78585.1 Public Mus musculus 1 Mob4 23 108 98 CCDS HistoryNCBI Gene:19070Re-query CCDS DB by CCDS ID:78585.1Re-query CCDS DB by GeneID:19070See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78585.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159311.7 ENSMUSP00000124790.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159311.7Link to Ensembl Protein Viewer:ENSMUSP00000124790.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159311Re-query CCDS DB by Protein ID:ENSMUSP00000124790
Original member Current member NCBI NM_001310585.1 NP_001297514.1 Accepted alive Link to Nucleotide Sequence:NM_001310585.1Link to Protein Sequence:NP_001297514.1Re-query CCDS DB by Nucleotide ID:NM_001310585Re-query CCDS DB by Protein ID:NP_001297514Link to BLAST:NP_001297514.1

Chromosomal Locations for CCDS 78585.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 55131300 55131359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55145124 55145224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55148319 55148361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55148548 55148634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55150146 55150225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55150971 55151082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 55152675 55152806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGGTCATGGCGGAGGGGACGGCAGTGCTGAGGCGGAACAGGCCAGGCACCAAGGCGCAGTATATTCAAC
AGAACATAAGGGCAGACTGCTCCAATATTGACAAAATTCTTGAACCACCTGAAGGCCAAGATGAAGGTGT
ATGGAAGTATGAACATTTAAGGCAATTCTGCCTTGAACTAAATGGACTTGCTGTCAAACTTCAGAGTGAA
TGCCATCCAGATACCTGTACTCAGATGACAGCAACTGAACAATGGATTTTTCTTTGTGCAGCTCATAAAA
CTCCAAAAGAGTGTCCTGCCATAGATTATACAAGACACACACTGGATGGTGCTGCATGTCTTCTGAATAG
CAATAAATATTTTCCCAGCAGGGTTAGCATAAAAGAATCATCTGTAGCAAAACTAGGATCAGTGTGCCGT
AGGATTTATAGAATATTTTCACATGCCTATTTTCATCACCGGCAGATATTTGATGAATATGAAAATGAAA
CATTTTTATGTCATCGGTTTACCAAATTTGTGATGAAATATAATCTGATGTCGAAGGATAACCTGATTGT
ACCAATTTTAGAAGAGGAAGTTCAGAACTCAGTTTCTGGGGAAAGTGAAGCATGA

Translation (204 aa):
MVMAEGTAVLRRNRPGTKAQYIQQNIRADCSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSE
CHPDTCTQMTATEQWIFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCR
RIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH