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Report for CCDS7811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7811.1 Public Homo sapiens 11 BTBD10 24 110 108 CCDS HistoryNCBI Gene:84280Re-query CCDS DB by CCDS ID:7811.1Re-query CCDS DB by GeneID:84280See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278174.10 ENSP00000278174.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278174.10Link to Ensembl Protein Viewer:ENSP00000278174.5Re-query CCDS DB by Nucleotide ID:ENST00000278174Re-query CCDS DB by Protein ID:ENSP00000278174
Original member Current member NCBI NM_032320.7 NP_115696.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032320.7Link to Protein Sequence:NP_115696.2Re-query CCDS DB by Nucleotide ID:NM_032320Re-query CCDS DB by Protein ID:NP_115696Link to BLAST:NP_115696.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115696.2 475 Q9BSF8-1 475 100% 0 0

Chromosomal Locations for CCDS 7811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 13388831 13389141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13403168 13403278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13405659 13405856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13413530 13413650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13417158 13417260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13419460 13419745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13421642 13421838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13445024 13445124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGGCAGGACGGCCTCATCCCTATGATGGTAACTCCAGTGATCCAGAGAATTGGGATCGGAAATTGCATA
GTAGACCTCGTAAACTTTATAAACATTCAAGTACTTCCTCGCGTATTGCTAAAGGAGGAGTTGACCACAC
CAAAATGAGTCTACATGGTGCTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGA
TCACGAGATTCATCTCATGAAAGAACGGAGTCTCAGCTCACTCCTTGTATTAGAAATGTGACTTCTCCAA
CACGACAGCACCATGTTGAACGAGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCGCGTCCTCAAAA
AGCATCCCCAAATGGTTCCATTAGCAGTGCTGGGAACAGCAGCAGAAACAGTAGTCAGTCAAGTTCAGAT
GGTAGCTGTAAGACAGCTGGGGAGATGGTGTTTGTATATGAAAATGCAAAAGAAGGAGCTCGGAATATAA
GAACGTCAGAACGAGTGACACTAATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGC
ACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGAGAACATAACTTTACACGACCCAATGAG
AAAGGAGAGTATGAGGTGGCAGAGGGAATTGGTTCCACTGTGTTTCGAGCGATTCTGGATTACTATAAAA
CAGGAATAATCCGTTGTCCTGATGGCATATCTATTCCTGAACTGAGAGAAGCATGTGACTATCTTTGTAT
CTCTTTTGAATATAGCACTATTAAATGTAGAGATCTCAGTGCCCTAATGCATGAGTTATCAAATGATGGT
GCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTG
GGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACC
ACAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAA
AACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTT
ATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCA
AAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTA
AAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGC
ATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGA
TCCTGATGCACAGAATCCAATGCTGTGA

Translation (475 aa):
MAGRPHPYDGNSSDPENWDRKLHSRPRKLYKHSSTSSRIAKGGVDHTKMSLHGASGGHERSRDRRRSSDR
SRDSSHERTESQLTPCIRNVTSPTRQHHVEREKDHSSSRPSSPRPQKASPNGSISSAGNSSRNSSQSSSD
GSCKTAGEMVFVYENAKEGARNIRTSERVTLIVDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNE
KGEYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDLSALMHELSNDG
ARRQFEFYLEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIE
NRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCV
KSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDPDAQNPML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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