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Report for CCDS77862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77862.1 Public Homo sapiens 3 DCUN1D1 24 110 108 CCDS HistoryNCBI Gene:54165Re-query CCDS DB by CCDS ID:77862.1Re-query CCDS DB by GeneID:54165See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000469954.5 ENSP00000419359.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469954.5Link to Ensembl Protein Viewer:ENSP00000419359.1Re-query CCDS DB by Nucleotide ID:ENST00000469954Re-query CCDS DB by Protein ID:ENSP00000419359
Original member Current member EBI ENST00000460412.6 ENSP00000419440.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000460412.6Link to Ensembl Protein Viewer:ENSP00000419440.2Re-query CCDS DB by Nucleotide ID:ENST00000460412Re-query CCDS DB by Protein ID:ENSP00000419440
Original member Current member EBI ENST00000632685.1 ENSP00000488427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000632685.1Link to Ensembl Protein Viewer:ENSP00000488427.1Re-query CCDS DB by Nucleotide ID:ENST00000632685Re-query CCDS DB by Protein ID:ENSP00000488427
Original member Current member NCBI NM_001308101.2 NP_001295030.1 Accepted alive Link to Nucleotide Sequence:NM_001308101.2Link to Protein Sequence:NP_001295030.1Re-query CCDS DB by Nucleotide ID:NM_001308101Re-query CCDS DB by Protein ID:NP_001295030Link to BLAST:NP_001295030.1

Chromosomal Locations for CCDS 77862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 182945094 182945173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 182947238 182947334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 182947550 182947632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 182961226 182961356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 182963881 182964049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 182965537 182965711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGATCTTCACACAATCTAGTGAAAAAACAGCAGTAAGTTGTCTTTCTCAAAATGACTGGAAGTTAGATG
TTGCAACAGATAATTTTTTCCAAAATCCTGAACTTTATATACGAGAGAGTGTAAAAGGATCATTGGACAG
GAAGAAGTTAGAACAGCTGTACAATAGATACAAAGACCCTCAAGATGAGAATAAAATTGGAATAGATGGC
ATACAGCAGTTCTGTGATGACCTGGCACTCGATCCAGCCAGCATTAGTGTGTTGATTATTGCGTGGAAGT
TCAGAGCAGCAACACAGTGCGAGTTCTCCAAACAGGAGTTCATGGATGGCATGACAGAATTAGGATGTGA
CAGCATAGAAAAACTAAAGGCCCAGATACCCAAGATGGAACAAGAATTGAAAGAACCAGGACGATTTAAG
GATTTTTACCAGTTTACTTTTAATTTTGCAAAGAATCCAGGACAAAAAGGATTAGATCTAGAAATGGCCA
TTGCCTACTGGAACTTAGTGCTTAATGGAAGATTTAAATTCTTAGACTTATGGAATAAATTTTTGTTGGA
ACATCATAAACGATCAATACCAAAAGACACTTGGAATCTTCTTTTAGACTTCAGTACGATGATTGCAGAT
GACATGTCTAATTATGATGAAGAAGGAGCATGGCCTGTTCTTATTGATGACTTTGTGGAATTTGCACGCC
CTCAAATTGCTGGGACAAAAAGTACAACAGTGTAG

Translation (244 aa):
MIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDG
IQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFK
DFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIAD
DMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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