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Report for CCDS7743.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7743.1 Public Homo sapiens 11 ART5 24 110 108 CCDS HistoryNCBI Gene:116969Re-query CCDS DB by CCDS ID:7743.1Re-query CCDS DB by GeneID:116969See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7743.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359918.8 ENSP00000352992.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359918.8Link to Ensembl Protein Viewer:ENSP00000352992.4Re-query CCDS DB by Nucleotide ID:ENST00000359918Re-query CCDS DB by Protein ID:ENSP00000352992
Original member Current member EBI ENST00000397068.8 ENSP00000380258.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397068.8Link to Ensembl Protein Viewer:ENSP00000380258.3Re-query CCDS DB by Nucleotide ID:ENST00000397068Re-query CCDS DB by Protein ID:ENSP00000380258
Original member Current member NCBI NM_001079536.2 NP_001073004.1 Accepted alive Link to Nucleotide Sequence:NM_001079536.2Link to Protein Sequence:NP_001073004.1Re-query CCDS DB by Nucleotide ID:NM_001079536Re-query CCDS DB by Protein ID:NP_001073004Link to BLAST:NP_001073004.1
Original member Current member NCBI NM_053017.5 NP_443750.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_053017.5Link to Protein Sequence:NP_443750.2Re-query CCDS DB by Nucleotide ID:NM_053017Re-query CCDS DB by Protein ID:NP_443750Link to BLAST:NP_443750.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073004.1 291 Q96L15-1 291 100% 0 0
NP_443750.2 291 Q96L15-1 291 100% 0 0

Chromosomal Locations for CCDS 7743.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3638738 3638793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639003 3639035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639642 3640371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3641806 3641862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCGCTGGCGGCTTTGATGATCGCCCTCGGCAGCCTCGGCCTCCACACCTGGCAGGCCCAGGCTGTTC
CCATCCTGCCCCTGGGCCTGGCTCCAGACACCTTTGACGATACCTATGTGGGTTGTGCAGAGGAGATGGA
GGAGAAGGCAGCCCCCCTGCTAAAGGAGGAAATGGCCCACCATGCCCTGCTGCGGGAATCCTGGGAGGCA
GCCCAGGAGACCTGGGAGGACAAGCGTCGAGGGCTTACCTTGCCCCCTGGCTTCAAAGCCCAGAATGGAA
TAGCCATTATGGTCTACACCAACTCATCGAACACCTTGTACTGGGAGTTGAATCAGGCCGTGCGGACGGG
CGGAGGCTCCCGGGAGCTCTACATGAGGCACTTTCCCTTCAAGGCCCTGCATTTCTACCTGATCCGGGCC
CTGCAGCTGCTGCGAGGCAGTGGGGGCTGCAGCAGGGGACCTGGGGAGGTGGTGTTCCGAGGTGTGGGCA
GCCTTCGCTTTGAACCCAAGAGGCTGGGAGACTCTGTCCGCTTGGGCCAGTTTGCCTCCAGCTCCCTGGA
TAAGGCAGTGGCCCACAGATTTGGTAATGCCACCCTCTTCTCTCTAACAACTTGCTTTGGGGCCCCTATA
CAGGCCTTCTCTGTCTTTCCCAAGGAGCGCGAGGTGCTGATTCCCCCCCATGAAGTCTTTTTGGTTACCA
GATTCTCTCAGGATGGAGCCCAGAGCTTGGTGACTCTCTGGAGCTATAATCAGACCTGTAGCCATTTTAA
CTGCGCCTATCTGGGTGGGGAGAAGAGGCGGGGCTGTGTGTCTGCGCCAGGAGCCCTGGGAACGGGTGAC
CTTCATATGACGAAGAGGCACCTCCAGCAGCCTTGA

Translation (291 aa):
MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAHHALLRESWEA
AQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRA
LQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLTTCFGAPI
QAFSVFPKEREVLIPPHEVFLVTRFSQDGAQSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGD
LHMTKRHLQQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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