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Report for CCDS76388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76388.1 Public Homo sapiens 11 BTBD10 24 110 108 CCDS HistoryNCBI Gene:84280Re-query CCDS DB by CCDS ID:76388.1Re-query CCDS DB by GeneID:84280See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528120.5 ENSP00000435257.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528120.5Link to Ensembl Protein Viewer:ENSP00000435257.1Re-query CCDS DB by Nucleotide ID:ENST00000528120Re-query CCDS DB by Protein ID:ENSP00000435257
Original member Current member NCBI NM_001297741.2 NP_001284670.1 Accepted alive Link to Nucleotide Sequence:NM_001297741.2Link to Protein Sequence:NP_001284670.1Re-query CCDS DB by Nucleotide ID:NM_001297741Re-query CCDS DB by Protein ID:NP_001284670Link to BLAST:NP_001284670.1

Chromosomal Locations for CCDS 76388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 13388831 13389141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13403168 13403278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13405659 13405856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13413530 13413650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13417158 13417260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13419460 13419745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 13421642 13421795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGAGTCTACATGGTGCTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGATCAC
GAGATTCATCTCATGAAAGAACGGAGTCTCAGCTCACTCCTTGTATTAGAAATGTGACTTCTCCAACACG
ACAGCACCATGTTGAACGAGAAAAAGATCACAGTTCCTCTCGTCCAAGCAGTCCGCGTCCTCAAAAAGCA
TCCCCAAATGGTTCCATTAGCAGTGCTGGGAACAGCAGCAGAAACAGTAGTCAGTCAAGTTCAGATGGTA
GCTGTAAGACAGCTGGGGAGATGGTGTTTGTATATGAAAATGCAAAAGAAGGAGCTCGGAATATAAGAAC
GTCAGAACGAGTGACACTAATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGCACAG
CCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGAGAACATAACTTTACACGACCCAATGAGAAAG
GAGAGTATGAGGTGGCAGAGGGAATTGGTTCCACTGTGTTTCGAGCGATTCTGGATTACTATAAAACAGG
AATAATCCGTTGTCCTGATGGCATATCTATTCCTGAACTGAGAGAAGCATGTGACTATCTTTGTATCTCT
TTTGAATATAGCACTATTAAATGTAGAGATCTCAGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTC
GTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGA
ACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAG
ATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACA
GAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCC
TACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGA
CCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGA
GTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCC
AACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCT
GATGCACAGAATCCAATGCTGTGA

Translation (427 aa):
MSLHGASGGHERSRDRRRSSDRSRDSSHERTESQLTPCIRNVTSPTRQHHVEREKDHSSSRPSSPRPQKA
SPNGSISSAGNSSRNSSQSSSDGSCKTAGEMVFVYENAKEGARNIRTSERVTLIVDNTRFVVDPSIFTAQ
PNTMLGRMFGSGREHNFTRPNEKGEYEVAEGIGSTVFRAILDYYKTGIIRCPDGISIPELREACDYLCIS
FEYSTIKCRDLSALMHELSNDGARRQFEFYLEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQ
MGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGRPEVIYNYVQR
PFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP
DAQNPML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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