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Report for CCDS74471.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74471.1 Public Homo sapiens 19 ZNF135 24 110 108 CCDS HistoryNCBI Gene:7694Re-query CCDS DB by CCDS ID:74471.1Re-query CCDS DB by GeneID:7694See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74471.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313434.10 ENSP00000321406.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313434.10Link to Ensembl Protein Viewer:ENSP00000321406.5Re-query CCDS DB by Nucleotide ID:ENST00000313434Re-query CCDS DB by Protein ID:ENSP00000321406
Original member Current member NCBI NM_001289401.2 NP_001276330.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001289401.2Link to Protein Sequence:NP_001276330.1Re-query CCDS DB by Nucleotide ID:NM_001289401Re-query CCDS DB by Protein ID:NP_001276330Link to BLAST:NP_001276330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276330.1 658 P52742-1 658 100% 0 0

Chromosomal Locations for CCDS 74471.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58060003 58060035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58061580 58061706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58063446 58063541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58066741 58068461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGACCCCTGGGGTGCGCGTCTCCACAGACCCGGAGCAAGTGACGTTTGAGGACGTGGTAGTGGGCTTCA
GCCAGGAGGAGTGGGGGCAGCTGAAGCCTGCCCAGAGGACCCTGTACCGTGATGTAATGCTGGACACCTT
CAGGCTTCTGGTCTCTGTGGGACATTGGTTACCGAAGCCGAATGTCATCTCCCTGCTGGAGCAAGAGGCA
GAGCTGTGGGCGGTGGAGTCTAGACTTCCCCAAGGCGTGTACCCAGACTTGGAAACTAGACCCAAAGTCA
AACTGTCAGTTCTAAAGCAAGGCATCTCTGAAGAAATATCCAACAGTGTCATCTTGGTAGAAAGATTCCT
GTGGGATGGTCTGTGGTACTGCAGGGGTGAGGACACTGAGGGCCACTGGGAATGGAGTTGTGAGAGTCTA
GAGAGCCTGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGCCTGTTCTGGAGCAGTGGCAGAGGAATG
GGTTTGGGGAAAACATAAGTCTGAACCCTGATCTCCCACATCAACCAATGACTCCTGAAAGACAAAGCCC
CCACACATGGGGAACACGTGGAAAAAGGGAGAAGCCAGACCTAAATGTTTTACAGAAAACCTGTGTAAAA
GAGAAACCCTACAAATGTCAGGAATGCGGAAAGGCCTTTAGTCACAGCTCAGCACTTATCGAACACCACC
GGACGCACACAGGAGAGAGACCTTACGAATGTCACGAATGCTTAAAAGGCTTCCGGAACAGCTCGGCACT
TACCAAACACCAGAGAATCCATACTGGGGAGAAACCCTATAAATGCACTCAGTGTGGGAGGACCTTCAAC
CAAATTGCCCCACTGATCCAGCACCAGAGAACTCACACAGGTGAGAAGCCCTATGAATGCAGCGAATGTG
GGAAATCCTTCAGTTTTAGGTCCTCCTTCAGCCAGCACGAGCGAACTCACACAGGCGAGAAGCCCTACGA
GTGCAGTGAGTGTGGGAAAGCCTTCCGGCAAAGCATCCACCTCACCCAGCATCTGCGAATCCACACTGGG
GAGAAACCCTATCAGTGTGGTGAGTGTGGCAAGGCCTTCAGCCACAGCTCATCCTTGACCAAACACCAGC
GAATCCACACAGGGGAGAAGCCCTACGAGTGCCATGAGTGTGGAAAAGCCTTCACCCAGATCACACCACT
GATTCAGCACCAGAGGACCCACACAGGAGAAAAGCCCTATGAGTGTGGTGAGTGTGGGAAAGCCTTCAGT
CAGAGCACACTCCTGACCGAGCATCGGAGGATTCACACAGGAGAGAAGCCCTATGGATGCAACGAGTGTG
GGAAAACCTTCAGCCACAGCTCCTCACTCAGCCAGCATGAGCGGACACACACAGGAGAGAAGCCCTATGA
GTGCAGTCAGTGTGGGAAGGCCTTCCGGCAGAGCACACACCTCACCCAACACCAGCGAATCCACACAGGG
GAGAAGCCCTATGAATGCAATGACTGCGGCAAGGCATTCAGTCACAGCTCGTCCCTCACCAAACATCAGC
GAATCCACACTGGGGAGAAGCCCTACGAATGCAACCAGTGTGGCAGAGCCTTCAGCCAGCTTGCTCCCCT
CATTCAGCATCAGAGGATCCACACAGGAGAGAAACCCTATGAATGTAACCAGTGTGGCAGAGCCTTCAGC
CAGAGCTCCCTTCTCATCGAACACCAGAGGATTCACACCAAGGAAAAGCCGTATGGGTGCAATGAGTGTG
GGAAATCCTTCAGCCACAGCTCCTCGCTCAGCCAGCACGAAAGGACGCACACTGGGGAAAAGCCCTATGA
GTGTCACGATTGCGGAAAGTCCTTTAGGCAGAGCACCCACCTCACTCAGCACCGGAGGATCCACACAGGA
GAGAAGCCATATGCATGCAGGGACTGTGGAAAGGCCTTTACCCACAGCTCCTCCCTTACCAAGCACCAGA
GAACTCACACTGGATAA

Translation (658 aa):
MTPGVRVSTDPEQVTFEDVVVGFSQEEWGQLKPAQRTLYRDVMLDTFRLLVSVGHWLPKPNVISLLEQEA
ELWAVESRLPQGVYPDLETRPKVKLSVLKQGISEEISNSVILVERFLWDGLWYCRGEDTEGHWEWSCESL
ESLAVPVAFTPVKTPVLEQWQRNGFGENISLNPDLPHQPMTPERQSPHTWGTRGKREKPDLNVLQKTCVK
EKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSALTKHQRIHTGEKPYKCTQCGRTFN
QIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYECSECGKAFRQSIHLTQHLRIHTG
EKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFS
QSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTHLTQHQRIHTG
EKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAPLIQHQRIHTGEKPYECNQCGRAFS
QSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYECHDCGKSFRQSTHLTQHRRIHTG
EKPYACRDCGKAFTHSSSLTKHQRTHTG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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