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Report for CCDS74307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74307.1 Public Homo sapiens 19 SMIM7 24 110 108 CCDS HistoryNCBI Gene:79086Re-query CCDS DB by CCDS ID:74307.1Re-query CCDS DB by GeneID:79086See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358726.6 ENSP00000351569.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358726.6Link to Ensembl Protein Viewer:ENSP00000351569.5Re-query CCDS DB by Nucleotide ID:ENST00000358726Re-query CCDS DB by Protein ID:ENSP00000351569
Original member Current member EBI ENST00000487803.5 ENSP00000437332.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487803.5Link to Ensembl Protein Viewer:ENSP00000437332.1Re-query CCDS DB by Nucleotide ID:ENST00000487803Re-query CCDS DB by Protein ID:ENSP00000437332
Original member Current member EBI ENST00000627144.2 ENSP00000486146.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000627144.2Link to Ensembl Protein Viewer:ENSP00000486146.1Re-query CCDS DB by Nucleotide ID:ENST00000627144Re-query CCDS DB by Protein ID:ENSP00000486146
Original member Current member NCBI NM_001300925.2 NP_001287854.1 Accepted alive Link to Nucleotide Sequence:NM_001300925.2Link to Protein Sequence:NP_001287854.1Re-query CCDS DB by Nucleotide ID:NM_001300925Re-query CCDS DB by Protein ID:NP_001287854Link to BLAST:NP_001287854.1

Chromosomal Locations for CCDS 74307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 16652862 16652961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16654035 16654125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16659395 16659447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16659959 16660000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16660085 16660110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGATCGGAGACATCCTGCTGTTCGGGACGTTGCTGATGAATGCCGGGGCGGTGCTGAACTTTAAGCTGA
AAAAGAAGGACACGCAGGGCTTTGGGGAGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCCGGGAATT
CTTGCTGAGCCTCAGATACTTTCGAATCTTCATCGCCCTGTGGAACATCTTCATGATGTTCTGCATGATT
GTGCTGAGAAAACTCAAGCAGATTGCCTTTCCATCTAGCACTGGGGCCATAACTCTGATACTACTGTTAA
CGAATTGTGAGATTTGCTGTAAATGGATTTAG

Translation (103 aa):
MIGDILLFGTLLMNAGAVLNFKLKKKDTQGFGEESREPSTGDNIREFLLSLRYFRIFIALWNIFMMFCMI
VLRKLKQIAFPSSTGAITLILLLTNCEICCKWI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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