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Report for CCDS74251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74251.1 Public Homo sapiens 19 PLEKHJ1 24 110 108 CCDS HistoryNCBI Gene:55111Re-query CCDS DB by CCDS ID:74251.1Re-query CCDS DB by GeneID:55111See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587394.6 ENSP00000464955.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587394.6Link to Ensembl Protein Viewer:ENSP00000464955.1Re-query CCDS DB by Nucleotide ID:ENST00000587394Re-query CCDS DB by Protein ID:ENSP00000464955
Original member Current member NCBI NM_001300836.3 NP_001287765.1 Accepted alive Link to Nucleotide Sequence:NM_001300836.3Link to Protein Sequence:NP_001287765.1Re-query CCDS DB by Nucleotide ID:NM_001300836Re-query CCDS DB by Protein ID:NP_001287765Link to BLAST:NP_001287765.1

Chromosomal Locations for CCDS 74251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2230163 2230612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2233998 2234061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2234150 2234240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2235762 2235828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2235923 2235990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2236155 2236248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGCGGCCGAGCTGGGCA
TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGCGGCTGGTGAAGCTGGTGGTGAATTTCCTCTTCTA
CTTTCGGACAGACGAGGCCGAGCCCGTCGGAGCCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAGAG
CCCGGCACCTTCTCCATCAGCTTCATTGAGGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAGCGAGG
AGCAGTGTCAGGAGTGGATGGAGGCTCTGCGTCGGGCCAGCTACGAGTTCATGCGGAGAAGCCTCATCTT
CTACAGGAACGAAATCCGGAAGGTGACGGGCAAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCAT
CGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGCCCGC
GCCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAG
GGCGCAACCCACGCCCCGGAGGGTGAACAGTCTGGGGGTTCACAGTGCCGGGGTAAAGGTGAAGAGCTCA
GGGCAGGCGCCAGGGCGCTCAGGAAGGGGCTCAGGCCGCGGGGAGGCCTCCGAGGAATGTGGTGGCGACG
GGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGCGTTTCCGAGAACGGGGTTCG
GCGTTGTCAGCGTCTAGTCAGCACCAAGCGGGTGGAGGCAGGCGCGGGCCTGGGGACGAGATAG

Translation (277 aa):
MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREE
PGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKKHQGTHDRPAPH
RRACCEPWTAEKYKSKCTCSTCPRRPHSTIAQHMASCVTAQAPSHARAQPTPRRVNSLGVHSAGVKVKSS
GQAPGRSGRGSGRGEASEECGGDGPAFGTGAARRGSRPGGVSENGVRRCQRLVSTKRVEAGAGLGTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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