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Report for CCDS74199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74199.1 Public Homo sapiens 18 RMC1 24 110 108 CCDS HistoryNCBI Gene:29919Re-query CCDS DB by CCDS ID:74199.1Re-query CCDS DB by GeneID:29919See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74199.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615148.4 ENSP00000482573.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615148.4Link to Ensembl Protein Viewer:ENSP00000482573.1Re-query CCDS DB by Nucleotide ID:ENST00000615148Re-query CCDS DB by Protein ID:ENSP00000482573
Original member Current member NCBI NM_001276342.1 NP_001263271.1 Accepted alive Link to Nucleotide Sequence:NM_001276342.1Link to Protein Sequence:NP_001263271.1Re-query CCDS DB by Nucleotide ID:NM_001276342Re-query CCDS DB by Protein ID:NP_001263271Link to BLAST:NP_001263271.1

Chromosomal Locations for CCDS 74199.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23503619 23503720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23504371 23504447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23506970 23507054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23515856 23515996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23516320 23516423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23518890 23518979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23519069 23519174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23520202 23520313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23524130 23524174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23524429 23524482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23526637 23526765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23527795 23527901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23529179 23529298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23529635 23529712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530028 23530132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530229 23530297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530511 23530612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23531625 23531684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1686 nt):
ATGGGCGAGGAGGACTACTATCTGGAGCTGTGCGAGCGGCCGGTGCAGTTCGAGAAGGCGAACCCTGTCA
ACTGCGTCTTCTTCGATGAGGCCAACAAGCAGGTTTTTGCTGTTCGATCTGGTGGAGCTACTGGCGTGGT
AGTTAAAGGCCCAGATGATAGGAATCCCATCTCATTTAGAATGGATGACAAAGGAGAAGTGAAGTGCATT
AAGTTTTCCTTAGAAAATAAGATATTGGCTGTTCAGAGGACCTCAAAGACTGTGGTATTACCAGAGAAAC
GGAGTCTGAAACTCTTGAAGAGCCACAATCTCAATGTGAATTGGTACATGTACTGCCCCGAGAGCGCCGT
GATCTTGCTGTCTACCACGGTCCTGGAGAATGTCCTGCAGCCTTTTCACTTTAGGGCTGGCACTATGTCG
AAGCTGCCCAAATTTGAGATTGAATTACCAGCTGCGCCTAAGTCAACTAAACCCAGCCTTTCCGAAAGAG
ACATCGCAATGGCTACCATATACGGGCAGCTGTATGTTCTCTTCTTGAGGCATCATTCTCGGACCTCCAA
CAGCACAGGAGCGGAGGTGGTCCTCTATCATCTACCACGAGAAGGTGCCTGTAAAAAGATGCACATATTG
AAGTTAAATAGGACGGGAAAGTTTGCCCTGAACGTGGTGGACAACCTGGTAGTCGTGCATCATCAGGATA
CAGAGACATCGGTAATATTCGATATCAAGTTACGGGGAGAGTTTGACGGCTCCGTTACCTTCCACCACCC
CGTGCTTCCCGCTCGATCGATCCAGCCCTATCAGATCCCCATCACAGGTCCTGCTGCCGTGACCAGCCAG
TCTCCTGTTCCATGTAAACTCTATTCTTCATCTTGGATTGTCTTTCAACCTGACATCATTATCAGCGCAA
GCCAAGGTTACCTCTGGAACCTCCAAGTGAAACTTGAGCCCATAGTAAATCTCTTACCAGACAAAGGAAG
ACTCATGGACTTTCTCCTCCAGAGAAAGGAATGCAAGATGGTCATCCTGTCTGTCTGTTCACAGATGTTA
AGTGAGTCAGACAGAGCATCGCTGCCCGTGATAGCCACTGTTTTTGATAAACTCAACCATGAGTATAAAA
AGTACCTGGATGCCGAGCAGAGTTATGCGATGGCGGTGGAAGCAGGGCAGAGCCGAAGCAGCCCGCTCCT
CAAGAGGCCGGTGCGGACCCAGGCGGTGCTGGACCAGTCAGATGTGTACACCCATGTCCTGTCAGCCTTT
GTGGAAAAGAAGGAGATGCCTCATAAATTTGTGATAGCCGTGCTGATGGAATACATTCGTTCTCTTAACC
AGTTTCAGATTGCAGTACAGCATTACCTACATGAACTTGTTATCAAAACCCTTGTCCAGCACAACCTCTT
TTATATGCTGCATCAGTTCCTGCAGTACCACGTCCTCAGCGACTCCAAACCTTTGGCTTGTCTGCTGTTA
TCCCTAGAGAGTTTCTATCCTCCTGCTCATCAGCTATCTCTGGACATGCTGAAGATGCTGCAAAGCAGAC
TGAAGACAACATGCTTTTCTATACAATATTCCGCTTTTTTGAACAGCGAAACCAGCGTTTGCGAGGGAGC
CCCAATTTCACACCAGGGGAACACTGTGAAGAACATGTTGCTTTTTTCAAACAGATTTTTGGAGACCAAG
CTCTAA

Translation (561 aa):
MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCI
KFSLENKILAVQRTSKTVVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMS
KLPKFEIELPAAPKSTKPSLSERDIAMATIYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHIL
KLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPITGPAAVTSQ
SPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQML
SESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAF
VEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLL
SLESFYPPAHQLSLDMLKMLQSRLKTTCFSIQYSAFLNSETSVCEGAPISHQGNTVKNMLLFSNRFLETK
L


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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  UCSC Genome Browser
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