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Report for CCDS73794.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73794.1 Public Homo sapiens 16 NPRL3 24 110 108 CCDS HistoryNCBI Gene:8131Re-query CCDS DB by CCDS ID:73794.1Re-query CCDS DB by GeneID:8131See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73794.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399953.7 ENSP00000382834.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399953.7Link to Ensembl Protein Viewer:ENSP00000382834.4Re-query CCDS DB by Nucleotide ID:ENST00000399953Re-query CCDS DB by Protein ID:ENSP00000382834
Original member Current member NCBI NM_001243248.2 NP_001230177.1 Accepted alive Link to Nucleotide Sequence:NM_001243248.2Link to Protein Sequence:NP_001230177.1Re-query CCDS DB by Nucleotide ID:NM_001243248Re-query CCDS DB by Protein ID:NP_001230177Link to BLAST:NP_001230177.1
Original member Current member NCBI NM_001243249.2 NP_001230178.1 Accepted alive Link to Nucleotide Sequence:NM_001243249.2Link to Protein Sequence:NP_001230178.1Re-query CCDS DB by Nucleotide ID:NM_001243249Re-query CCDS DB by Protein ID:NP_001230178Link to BLAST:NP_001230178.1

Chromosomal Locations for CCDS 73794.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 86705 86870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88698 88890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89713 89902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 92596 92725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 93219 93325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 98145 98301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 100372 100509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 110525 110606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 112622 112775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 119126 119255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 130522 130591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 138150 138267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGCGGGACAACACCAGCCCCATCAGCGTGATTCTGGTGAGCTCGGGGAGCAGGGGCAATAAGCTGCTGT
TCAGGTACCCCTTCCAGAGAAGCCAGGAGCACCCGGCGTCCCAGACAAGTAAGCCGCGTAGCAGATACGC
TGCCAGCAACACGGGCGACCATGCTGATGAGCAGGACGGCGATTCCAGGTTTTCAGATGTTATTCTGGCA
ACAATTTTGGCAACCAAGTCTGAAATGTGTGGCCAAAAATTTGAACTGAAGATTGATAATGTGCGATTTG
TTGGGCACCCAACACTGCTACAGCATGCTCTGGGGCAGGCCAACGCAGACCCGTCAGTGATAAACTGTCT
GCATAACCTGTCCCGTCGTATCGCCACCGTGCTGCAGCACGAGGAGCGCCGCTGCCAGTACCTCACCCGG
GAGGCCAAGCTGATCCTGGCGCTCCAGGATGAGGTGTCCGCCATGGCTGATGGAAATGAAGGTCCTCAGT
CCCCATTCCATCACATCCTGCCCAAGTGCAAGCTGGCCAGGGACCTCAAGGAAGCTTATGACAGCCTGTG
CACGTCGGGCGTAGTTCGGCTTCACATCAACAGCTGGCTGGAGGTGAGCTTCTGCCTGCCCCACAAGATC
CACTATGCGGCCTCCAGTCTGATCCCCCCAGAGGCCATCGAACGGAGCCTGAAAGCCATCCGCCCCTACC
ATGCCCTGCTGCTGCTCAGTGATGAGAAGTCCTTGCTGGGTGAGCTTCCTATTGACTGCTCCCCTGCCCT
AGTGCGGGTGATCAAGACCACATCTGCTGTGAAGAACCTGCAGCAGCTAGCCCAAGATGCGGACCTGGCC
TTGCTGCAGGTTTTCCAGCTTGCAGCTCATCTGGTGTACTGGGGCAAGGCCATCATCATCTACCCGCTGT
GTGAGAACAACGTCTACATGCTGTCTCCCAATGCCAGCGTATGTCTGTACTCCCCGCTGGCCGAGCAGTT
CTCCCACCAGTTCCCATCTCATGACCTGCCGTCCGTTCTTGCCAAGTTCTCCTTGCCGGTCTCCTTGTCA
GAATTTAGGAATCCCCTGGCCCCCGCTGTGCAGGAGACCCAGCTCATCCAGATGGTGGTGTGGATGCTGC
AGCGCCGGCTTCTCATCCAGCTGCACACCTATGTCTGCCTGATGGCCTCACCCAGCGAGGAGGAGCCCCG
TCCGCGAGAGGACGACGTCCCCTTCACTGCCCGGGTCGGCGGTCGCAGCCTCAGCACGCCCAACGCCCTC
AGCTTTGGCTCCCCAACCAGCAGCGATGACATGACCCTCACCAGCCCCAGCATGGACAACTCCAGCGCAG
AGCTACTTCCCAGCGGGGACTCGCCACTGAACCAGAGGATGACGGAGAACCTGCTGGCCAGCCTGTCGGA
GCATGAACGCGCAGCCATCCTCAGTGTACCCGCAGCCCAGAACCCTGAGGACCTCCGCATGTTTGCCAGG
CTCCTTCACTACTTCCGCGGCCGCCACCACCTGGAGGAGATTATGTACAACGAGAACACGCGGCGCTCCC
AGCTGCTCATGCTGTTTGACAAGTTCCGCAGCGTGCTGGTGGTGACCACCCACGAGGACCCTGTCATTGC
CGTCTTCCAGGCTCTGCTCCCCTGA

Translation (544 aa):
MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRSRYAASNTGDHADEQDGDSRFSDVILA
TILATKSEMCGQKFELKIDNVRFVGHPTLLQHALGQANADPSVINCLHNLSRRIATVLQHEERRCQYLTR
EAKLILALQDEVSAMADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKI
HYAASSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQDADLA
LLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAKFSLPVSLS
EFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDVPFTARVGGRSLSTPNAL
SFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFAR
LLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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