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Report for CCDS73540.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73540.1 Public Homo sapiens 12 MLXIP 24 110 108 CCDS HistoryNCBI Gene:22877Re-query CCDS DB by CCDS ID:73540.1Re-query CCDS DB by GeneID:22877See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73540.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319080.12 ENSP00000312834.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319080.12Link to Ensembl Protein Viewer:ENSP00000312834.6Re-query CCDS DB by Nucleotide ID:ENST00000319080Re-query CCDS DB by Protein ID:ENSP00000312834
Original member Current member NCBI NM_014938.6 NP_055753.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014938.6Link to Protein Sequence:NP_055753.3Re-query CCDS DB by Nucleotide ID:NM_014938Re-query CCDS DB by Protein ID:NP_055753Link to BLAST:NP_055753.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055753.3 919 Q9HAP2-1 919 100% 0 0

Chromosomal Locations for CCDS 73540.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 122078854 122079266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122127256 122127362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122127883 122127968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122129137 122129226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122129588 122129629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122129941 122130112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122130844 122130933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122132292 122132383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122133348 122133987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122135224 122135345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122135489 122135666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122137469 122137590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122138194 122138295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122138424 122138551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122138815 122138938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122140954 122141083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122141691 122141812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2760 nt):
ATGGCCGCCGACGTCTTCATGTGCTCCCCGCGCCGGCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGC
CCCAGGTGTCCGAGGACGACGACGACTCGGACACGGATGAGCCGTCCCCGCCGCCCGCCTCCGGCGCGGC
CACCCCGGCCCGGGCCCACGCGAGCGCCGCGCCACCGCCGCCTCGGGCCGGGCCGGGCCGCGAGGAACCT
CCGCGCCGCCAGCAGATCATCCACAGCGGCCACTTCATGGTGTCGTCGCCGCACCGAGAGCACCCGCCCA
AGAAGGGCTACGATTTCGACACGGTCAACAAACAGACGTGCCAGACCTACAGCTTCGGCAAGACTAGCTC
CTGCCACCTGTCCATCGACGCCTCGCTCACCAAGCTCTTCGAGTGCATGACTTTGGCCTACAGTGGGAAG
TTGGTGTCTCCAAAGTGGAAGAATTTCAAGGGCCTGAAGCTACAGTGGAGAGACAAGATCCGGCTCAATA
ATGCCATCTGGCGGGCCTGGTACATGCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCCACTTTGTGAC
ACCCCTGGACGGCTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGCCATCACCACGGAAGGGAAGTAC
TGGAAGAGCCGCATCGAGATTGTGATCCGGGAGTATCACAAGTGGAGAACCTACTTCAAGAAAAGGCTAC
AGCAGCACAAGGATGAGGACCTCTCCAGCCTGGTCCAGGACGATGACATGCTGTATTGGCACAAGCACGG
GGATGGATGGAAGACCCCCGTCCCCATGGAGGAGGATCCCCTGCTGGACACAGACATGCTCATGTCGGAA
TTCAGCGACACCCTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCCTGGCCCAATCCCCGGGAAATAG
CACATCTGGGAAATGCAGACATGATCCAGCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTTCATGGA
CACCTTTGAGCCTTTCCAGGACCTCTTCTCTTCTAGCCGCTCCATTTTTGGCTCCATGCTACCTGCATCT
GCCTCAGCACCTGTACCAGATCCCAACAACCCACCTGCACAGGAGAGCATCCTGCCGACCACAGCCCTCC
CCACTGTGAGCCTTCCTGACAGCCTCATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATGGATGAGCA
GGGCTGTGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCG
CCACTGAGTGTCCCGCAGCCCTTCCTCCCTGTCTTCACCATGCCCCTGCTGTCTCCCAGCCCCGCCCCAC
CGCCCATCTCCCCCGTGTTACCATTAGTTCCTCCTCCTGCCACTGCCCTGAACCCCCCGGCTCCACCCAC
CTTCCATCAGCCACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCATCACCCACACGGCCTCTGCC
ACCCTCACCCACGATGCCCCCGCCACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCACCACCCATCACC
CTGCCCCGTCAGCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACCCGGCCTCCCCAGCCACGGTTAAC
TTTTGTGCACCCCAAACCTGTATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCT
CCCAAACCAGAGCCCGTGTCCTTGGTGTTGAAGAATGCCCGTATCGCCCCAGCTGCCTTTTCAGGCCAAC
CACAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTC
CAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTG
GTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCCCAAGCACAGCGC
AAGACCCCCTGGGGAAGGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGGGCC
CAGTCGGGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCCAGTCCTCAATCT
CCCCAGAACAACTGCTCAGGGAAATCCGACCCCAAAAATGTGGCTGCACTAAAGAACCGGCAGATGAAGC
ACATCTCAGCTGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTTCGACATGCTCAACAGCCTCATCTC
CAACAATTCCAAGCTGACCAGTCACGCCATCACACTGCAGAAGACTGTGGAGTACATCACCAAGCTGCAG
CAGGAGAGAGGCCAGATGCAGGAGGAGGCCCGGCGGCTGCGGGAGGAGATCGAGGAGCTCAATGCCACCA
TCATCTCCTGCCAGCAGCTGCTCCCTGCCACGGGAGTCCCCGTTACCCGGCGCCAGTTTGATCACATGAA
AGACATGTTTGACGAATACGTGAAAACCCGGACCTTGCAGAATTGGAAGTTCTGGATTTTCAGCATCATC
ATCAAGCCGCTGTTTGAGTCGTTCAAGGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGCACCGGACGG
CGCTCTCCTGGCTGGACCAGCACTGCTCCCTGCCCATCCTCAGGCCGATGGTATTGAGCACGCTGCGGCA
GCTGAGCACCTCCACCTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACC
AGGATTGGCAAGAGATTGGGAGAGTCCTAG

Translation (919 aa):
MAADVFMCSPRRPRSRGRQVLLKPQVSEDDDDSDTDEPSPPPASGAATPARAHASAAPPPPRAGPGREEP
PRRQQIIHSGHFMVSSPHREHPPKKGYDFDTVNKQTCQTYSFGKTSSCHLSIDASLTKLFECMTLAYSGK
LVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLEKRKNPVCHFVTPLDGSVDVDEHRRPEAITTEGKY
WKSRIEIVIREYHKWRTYFKKRLQQHKDEDLSSLVQDDDMLYWHKHGDGWKTPVPMEEDPLLDTDMLMSE
FSDTLFSTLSSHQPVAWPNPREIAHLGNADMIQPGLIPLQPNLDFMDTFEPFQDLFSSSRSIFGSMLPAS
ASAPVPDPNNPPAQESILPTTALPTVSLPDSLIAPPTAPSLAHMDEQGCEHTSRTEDPFIQPTDFGPSEP
PLSVPQPFLPVFTMPLLSPSPAPPPISPVLPLVPPPATALNPPAPPTFHQPQKFAGVNKAPSVITHTASA
TLTHDAPATTFSQSQGLVITTHHPAPSAAPCGLALSPVTRPPQPRLTFVHPKPVSLTGGRPKQPHKIVPA
PKPEPVSLVLKNARIAPAAFSGQPQAVIMTSGPLKREGMLASTVSQSNVVIAPAAIARAPGVPEFHSSIL
VTDLGHGTSSPPAPVSRLFPSTAQDPLGKGEQVPLHGGSPQVTVTGPSRDCPNSGQASPCASEQSPSPQS
PQNNCSGKSDPKNVAALKNRQMKHISAEQKRRFNIKMCFDMLNSLISNNSKLTSHAITLQKTVEYITKLQ
QERGQMQEEARRLREEIEELNATIISCQQLLPATGVPVTRRQFDHMKDMFDEYVKTRTLQNWKFWIFSII
IKPLFESFKGMVSTSSLEELHRTALSWLDQHCSLPILRPMVLSTLRQLSTSTSILTDPAQLPEQASKAVT
RIGKRLGES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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